Gene : Medtr4g068475 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12970 - TUMOR NECROSIS FACTOR SUPERFAMILY, MEMBER 5-INDUCED PROTEIN 1 CLAST3 Description:  clast3, related protein
Genomic Order:  3104 Name:  ? Medtr4g068475
Secondary Identifier:  ? PAC:31108846
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g068475 0.5kb upstream 0.5kb upstream 4989 true chr4: 25716172-25721160 Medicago truncatula
Medtr4g068475 0.5kb upstream 0.5kb upstream 500 false chr4: 25716172-25716671 Medicago truncatula
Medtr4g068475 0.5kb downstream 0.5kb downstream 4989 true chr4: 25716672-25721660 Medicago truncatula
Medtr4g068475 0.5kb downstream 0.5kb downstream 500 false chr4: 25721161-25721660 Medicago truncatula
Medtr4g068475 1.0kb upstream 1.0kb upstream 5489 true chr4: 25715672-25721160 Medicago truncatula
Medtr4g068475 1.0kb upstream 1.0kb upstream 1000 false chr4: 25715672-25716671 Medicago truncatula
Medtr4g068475 1.0kb downstream 1.0kb downstream 5489 true chr4: 25716672-25722160 Medicago truncatula
Medtr4g068475 1.0kb downstream 1.0kb downstream 1000 false chr4: 25721161-25722160 Medicago truncatula
Medtr4g068475 2.0kb upstream 2.0kb upstream 6489 true chr4: 25714672-25721160 Medicago truncatula
Medtr4g068475 2.0kb upstream 2.0kb upstream 2000 false chr4: 25714672-25716671 Medicago truncatula
Medtr4g068475 2.0kb downstream 2.0kb downstream 6489 true chr4: 25716672-25723160 Medicago truncatula
Medtr4g068475 2.0kb downstream 2.0kb downstream 2000 false chr4: 25721161-25723160 Medicago truncatula
Medtr4g068475 5.0kb upstream 5.0kb upstream 9489 true chr4: 25711672-25721160 Medicago truncatula
Medtr4g068475 5.0kb upstream 5.0kb upstream 5000 false chr4: 25711672-25716671 Medicago truncatula
Medtr4g068475 5.0kb downstream 5.0kb downstream 9489 true chr4: 25716672-25726160 Medicago truncatula
Medtr4g068475 5.0kb downstream 5.0kb downstream 5000 false chr4: 25721161-25726160 Medicago truncatula
Medtr4g068475 10.0kb upstream 10.0kb upstream 14489 true chr4: 25706672-25721160 Medicago truncatula
Medtr4g068475 10.0kb upstream 10.0kb upstream 10000 false chr4: 25706672-25716671 Medicago truncatula
Medtr4g068475 10.0kb downstream 10.0kb downstream 14489 true chr4: 25716672-25731160 Medicago truncatula
Medtr4g068475 10.0kb downstream 10.0kb downstream 10000 false chr4: 25721161-25731160 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301325 5265 Fabidae View MSA
124073365 5270 Rosid View MSA
123738870 5271 Pentapetalae View MSA
122790398 5272 Eudicot View MSA
122043036 5273 Angiosperm View MSA
121344362 5274 Embryophyte View MSA
123425402 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.981       High
cufflinks 0.719        
cufflinks 0.709        
cufflinks 0.84        
cufflinks 0.792        
cufflinks 0.769        
cufflinks 1.036       High
cufflinks 0.753        
cufflinks 0.71        

0 Strain