Gene : Medtr4g068210 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR31088:SF6 - MEMBRANE-ASSOCIATED PROTEIN VIPP1, CHLOROPLASTIC Description:  membrane-associated 30 kDa protein
Genomic Order:  3079 Name:  ? Medtr4g068210
Secondary Identifier:  ? PAC:31109281
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g068210 0.5kb upstream 0.5kb upstream 6204 true chr4: 25570195-25576398 Medicago truncatula
Medtr4g068210 0.5kb upstream 0.5kb upstream 500 false chr4: 25570195-25570694 Medicago truncatula
Medtr4g068210 0.5kb downstream 0.5kb downstream 6204 true chr4: 25570695-25576898 Medicago truncatula
Medtr4g068210 0.5kb downstream 0.5kb downstream 500 false chr4: 25576399-25576898 Medicago truncatula
Medtr4g068210 1.0kb upstream 1.0kb upstream 6704 true chr4: 25569695-25576398 Medicago truncatula
Medtr4g068210 1.0kb upstream 1.0kb upstream 1000 false chr4: 25569695-25570694 Medicago truncatula
Medtr4g068210 1.0kb downstream 1.0kb downstream 6704 true chr4: 25570695-25577398 Medicago truncatula
Medtr4g068210 1.0kb downstream 1.0kb downstream 1000 false chr4: 25576399-25577398 Medicago truncatula
Medtr4g068210 2.0kb upstream 2.0kb upstream 7704 true chr4: 25568695-25576398 Medicago truncatula
Medtr4g068210 2.0kb upstream 2.0kb upstream 2000 false chr4: 25568695-25570694 Medicago truncatula
Medtr4g068210 2.0kb downstream 2.0kb downstream 7704 true chr4: 25570695-25578398 Medicago truncatula
Medtr4g068210 2.0kb downstream 2.0kb downstream 2000 false chr4: 25576399-25578398 Medicago truncatula
Medtr4g068210 5.0kb upstream 5.0kb upstream 10704 true chr4: 25565695-25576398 Medicago truncatula
Medtr4g068210 5.0kb upstream 5.0kb upstream 5000 false chr4: 25565695-25570694 Medicago truncatula
Medtr4g068210 5.0kb downstream 5.0kb downstream 10704 true chr4: 25570695-25581398 Medicago truncatula
Medtr4g068210 5.0kb downstream 5.0kb downstream 5000 false chr4: 25576399-25581398 Medicago truncatula
Medtr4g068210 10.0kb upstream 10.0kb upstream 15704 true chr4: 25560695-25576398 Medicago truncatula
Medtr4g068210 10.0kb upstream 10.0kb upstream 10000 false chr4: 25560695-25570694 Medicago truncatula
Medtr4g068210 10.0kb downstream 10.0kb downstream 15704 true chr4: 25570695-25586398 Medicago truncatula
Medtr4g068210 10.0kb downstream 10.0kb downstream 10000 false chr4: 25576399-25586398 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302101 5265 Fabidae View MSA
124067961 5270 Rosid View MSA
123738548 5271 Pentapetalae View MSA
122792154 5272 Eudicot View MSA
122046010 5273 Angiosperm View MSA
121345792 5274 Embryophyte View MSA
123427031 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.609        
cufflinks 4.994        
cufflinks 4.902        
cufflinks 0.392        
cufflinks 5.231       High
cufflinks 0.17       Low
cufflinks 0.588        
cufflinks 5.05       High
cufflinks 0.78        

0 Strain