Gene : Medtr4g068180 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR22957:SF26 - PROTEIN TBC-3, ISOFORM B Description:  RabGAP/TBC domain protein
Genomic Order:  3076 Name:  ? Medtr4g068180
Secondary Identifier:  ? PAC:31112822
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g068180 0.5kb upstream 0.5kb upstream 6185 true chr4: 25556845-25563029 Medicago truncatula
Medtr4g068180 0.5kb upstream 0.5kb upstream 500 false chr4: 25556845-25557344 Medicago truncatula
Medtr4g068180 0.5kb downstream 0.5kb downstream 6185 true chr4: 25557345-25563529 Medicago truncatula
Medtr4g068180 0.5kb downstream 0.5kb downstream 500 false chr4: 25563030-25563529 Medicago truncatula
Medtr4g068180 1.0kb upstream 1.0kb upstream 6685 true chr4: 25556345-25563029 Medicago truncatula
Medtr4g068180 1.0kb upstream 1.0kb upstream 1000 false chr4: 25556345-25557344 Medicago truncatula
Medtr4g068180 1.0kb downstream 1.0kb downstream 6685 true chr4: 25557345-25564029 Medicago truncatula
Medtr4g068180 1.0kb downstream 1.0kb downstream 1000 false chr4: 25563030-25564029 Medicago truncatula
Medtr4g068180 2.0kb upstream 2.0kb upstream 7685 true chr4: 25555345-25563029 Medicago truncatula
Medtr4g068180 2.0kb upstream 2.0kb upstream 2000 false chr4: 25555345-25557344 Medicago truncatula
Medtr4g068180 2.0kb downstream 2.0kb downstream 7685 true chr4: 25557345-25565029 Medicago truncatula
Medtr4g068180 2.0kb downstream 2.0kb downstream 2000 false chr4: 25563030-25565029 Medicago truncatula
Medtr4g068180 5.0kb upstream 5.0kb upstream 10685 true chr4: 25552345-25563029 Medicago truncatula
Medtr4g068180 5.0kb upstream 5.0kb upstream 5000 false chr4: 25552345-25557344 Medicago truncatula
Medtr4g068180 5.0kb downstream 5.0kb downstream 10685 true chr4: 25557345-25568029 Medicago truncatula
Medtr4g068180 5.0kb downstream 5.0kb downstream 5000 false chr4: 25563030-25568029 Medicago truncatula
Medtr4g068180 10.0kb upstream 10.0kb upstream 15685 true chr4: 25547345-25563029 Medicago truncatula
Medtr4g068180 10.0kb upstream 10.0kb upstream 10000 false chr4: 25547345-25557344 Medicago truncatula
Medtr4g068180 10.0kb downstream 10.0kb downstream 15685 true chr4: 25557345-25573029 Medicago truncatula
Medtr4g068180 10.0kb downstream 10.0kb downstream 10000 false chr4: 25563030-25573029 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312495 5265 Fabidae View MSA
124067650 5270 Rosid View MSA
123749842 5271 Pentapetalae View MSA
122786792 5272 Eudicot View MSA
122047637 5273 Angiosperm View MSA
121347047 5274 Embryophyte View MSA
123426413 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.923        
cufflinks 3.383        
cufflinks 3.029        
cufflinks 1.617        
cufflinks 3.053        
cufflinks 0.591       Low
cufflinks 2.275        
cufflinks 2.966        
cufflinks 2.288        

0 Strain