Gene : Medtr4g068230 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR11751//PTHR11751:SF435 - SUBGROUP I AMINOTRANSFERASE RELATED Description:  orn/lys/arg decarboxylase
Genomic Order:  3082 Name:  ? Medtr4g068230
Secondary Identifier:  ? PAC:31110762
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula POLYAMINSYN3-PWY Medicago truncatula pathologic  
Mtruncatula PWY-43 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g068230 0.5kb upstream 0.5kb upstream 3327 true chr4: 25582721-25586047 Medicago truncatula
Medtr4g068230 0.5kb upstream 0.5kb upstream 500 false chr4: 25582721-25583220 Medicago truncatula
Medtr4g068230 0.5kb downstream 0.5kb downstream 3327 true chr4: 25583221-25586547 Medicago truncatula
Medtr4g068230 0.5kb downstream 0.5kb downstream 500 false chr4: 25586048-25586547 Medicago truncatula
Medtr4g068230 1.0kb upstream 1.0kb upstream 3827 true chr4: 25582221-25586047 Medicago truncatula
Medtr4g068230 1.0kb upstream 1.0kb upstream 1000 false chr4: 25582221-25583220 Medicago truncatula
Medtr4g068230 1.0kb downstream 1.0kb downstream 3827 true chr4: 25583221-25587047 Medicago truncatula
Medtr4g068230 1.0kb downstream 1.0kb downstream 1000 false chr4: 25586048-25587047 Medicago truncatula
Medtr4g068230 2.0kb upstream 2.0kb upstream 4827 true chr4: 25581221-25586047 Medicago truncatula
Medtr4g068230 2.0kb upstream 2.0kb upstream 2000 false chr4: 25581221-25583220 Medicago truncatula
Medtr4g068230 2.0kb downstream 2.0kb downstream 4827 true chr4: 25583221-25588047 Medicago truncatula
Medtr4g068230 2.0kb downstream 2.0kb downstream 2000 false chr4: 25586048-25588047 Medicago truncatula
Medtr4g068230 5.0kb upstream 5.0kb upstream 7827 true chr4: 25578221-25586047 Medicago truncatula
Medtr4g068230 5.0kb upstream 5.0kb upstream 5000 false chr4: 25578221-25583220 Medicago truncatula
Medtr4g068230 5.0kb downstream 5.0kb downstream 7827 true chr4: 25583221-25591047 Medicago truncatula
Medtr4g068230 5.0kb downstream 5.0kb downstream 5000 false chr4: 25586048-25591047 Medicago truncatula
Medtr4g068230 10.0kb upstream 10.0kb upstream 12827 true chr4: 25573221-25586047 Medicago truncatula
Medtr4g068230 10.0kb upstream 10.0kb upstream 10000 false chr4: 25573221-25583220 Medicago truncatula
Medtr4g068230 10.0kb downstream 10.0kb downstream 12827 true chr4: 25583221-25596047 Medicago truncatula
Medtr4g068230 10.0kb downstream 10.0kb downstream 10000 false chr4: 25586048-25596047 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304718 5265 Fabidae View MSA
124050697 5270 Rosid View MSA
123742620 5271 Pentapetalae View MSA
122796978 5272 Eudicot View MSA
122048497 5273 Angiosperm View MSA
121348486 5274 Embryophyte View MSA
123425712 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.216       High
cufflinks 1.67        
cufflinks 1.913        
cufflinks 0.406        
cufflinks 2.844        
cufflinks 0.082     Low Low
cufflinks 0.806        
cufflinks 1.798        
cufflinks 0.315        

0 Strain