Gene : Medtr4g068900 M. truncatula Mt4.0v1
Defline:  (1 of 210) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Description:  PPR containing plant-like protein
Genomic Order:  3124 Name:  ? Medtr4g068900
Secondary Identifier:  ? PAC:31114253
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g068900 0.5kb upstream 0.5kb upstream 2543 true chr4: 25858142-25860684 Medicago truncatula
Medtr4g068900 0.5kb upstream 0.5kb upstream 500 false chr4: 25858142-25858641 Medicago truncatula
Medtr4g068900 0.5kb downstream 0.5kb downstream 2543 true chr4: 25858642-25861184 Medicago truncatula
Medtr4g068900 0.5kb downstream 0.5kb downstream 500 false chr4: 25860685-25861184 Medicago truncatula
Medtr4g068900 1.0kb upstream 1.0kb upstream 3043 true chr4: 25857642-25860684 Medicago truncatula
Medtr4g068900 1.0kb upstream 1.0kb upstream 1000 false chr4: 25857642-25858641 Medicago truncatula
Medtr4g068900 1.0kb downstream 1.0kb downstream 3043 true chr4: 25858642-25861684 Medicago truncatula
Medtr4g068900 1.0kb downstream 1.0kb downstream 1000 false chr4: 25860685-25861684 Medicago truncatula
Medtr4g068900 2.0kb upstream 2.0kb upstream 4043 true chr4: 25856642-25860684 Medicago truncatula
Medtr4g068900 2.0kb upstream 2.0kb upstream 2000 false chr4: 25856642-25858641 Medicago truncatula
Medtr4g068900 2.0kb downstream 2.0kb downstream 4043 true chr4: 25858642-25862684 Medicago truncatula
Medtr4g068900 2.0kb downstream 2.0kb downstream 2000 false chr4: 25860685-25862684 Medicago truncatula
Medtr4g068900 5.0kb upstream 5.0kb upstream 7043 true chr4: 25853642-25860684 Medicago truncatula
Medtr4g068900 5.0kb upstream 5.0kb upstream 5000 false chr4: 25853642-25858641 Medicago truncatula
Medtr4g068900 5.0kb downstream 5.0kb downstream 7043 true chr4: 25858642-25865684 Medicago truncatula
Medtr4g068900 5.0kb downstream 5.0kb downstream 5000 false chr4: 25860685-25865684 Medicago truncatula
Medtr4g068900 10.0kb upstream 10.0kb upstream 12043 true chr4: 25848642-25860684 Medicago truncatula
Medtr4g068900 10.0kb upstream 10.0kb upstream 10000 false chr4: 25848642-25858641 Medicago truncatula
Medtr4g068900 10.0kb downstream 10.0kb downstream 12043 true chr4: 25858642-25870684 Medicago truncatula
Medtr4g068900 10.0kb downstream 10.0kb downstream 10000 false chr4: 25860685-25870684 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303678 5265 Fabidae View MSA
124063386 5270 Rosid View MSA
123751448 5271 Pentapetalae View MSA
122786309 5272 Eudicot View MSA
122045873 5273 Angiosperm View MSA
121310522 5274 Embryophyte View MSA
123347983 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.189       High
cufflinks 0.063     Low Low
cufflinks 0.103        
cufflinks 0.069        
cufflinks 0.253       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.088        
cufflinks 0.086        
cufflinks 0.104        

0 Strain