Gene : Medtr4g064813 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR10739:SF28 - CHOLINE-PHOSPHATE CYTIDYLYLTRANSFERASE 2 Description:  choline-phosphate cytidylyltransferase
Genomic Order:  2895 Name:  ? Medtr4g064813
Secondary Identifier:  ? PAC:31114416
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g064813 0.5kb upstream 0.5kb upstream 2616 true chr4: 24187974-24190589 Medicago truncatula
Medtr4g064813 0.5kb upstream 0.5kb upstream 500 false chr4: 24187974-24188473 Medicago truncatula
Medtr4g064813 0.5kb downstream 0.5kb downstream 2616 true chr4: 24188474-24191089 Medicago truncatula
Medtr4g064813 0.5kb downstream 0.5kb downstream 500 false chr4: 24190590-24191089 Medicago truncatula
Medtr4g064813 1.0kb upstream 1.0kb upstream 3116 true chr4: 24187474-24190589 Medicago truncatula
Medtr4g064813 1.0kb upstream 1.0kb upstream 1000 false chr4: 24187474-24188473 Medicago truncatula
Medtr4g064813 1.0kb downstream 1.0kb downstream 3116 true chr4: 24188474-24191589 Medicago truncatula
Medtr4g064813 1.0kb downstream 1.0kb downstream 1000 false chr4: 24190590-24191589 Medicago truncatula
Medtr4g064813 2.0kb upstream 2.0kb upstream 4116 true chr4: 24186474-24190589 Medicago truncatula
Medtr4g064813 2.0kb upstream 2.0kb upstream 2000 false chr4: 24186474-24188473 Medicago truncatula
Medtr4g064813 2.0kb downstream 2.0kb downstream 4116 true chr4: 24188474-24192589 Medicago truncatula
Medtr4g064813 2.0kb downstream 2.0kb downstream 2000 false chr4: 24190590-24192589 Medicago truncatula
Medtr4g064813 5.0kb upstream 5.0kb upstream 7116 true chr4: 24183474-24190589 Medicago truncatula
Medtr4g064813 5.0kb upstream 5.0kb upstream 5000 false chr4: 24183474-24188473 Medicago truncatula
Medtr4g064813 5.0kb downstream 5.0kb downstream 7116 true chr4: 24188474-24195589 Medicago truncatula
Medtr4g064813 5.0kb downstream 5.0kb downstream 5000 false chr4: 24190590-24195589 Medicago truncatula
Medtr4g064813 10.0kb upstream 10.0kb upstream 12116 true chr4: 24178474-24190589 Medicago truncatula
Medtr4g064813 10.0kb upstream 10.0kb upstream 10000 false chr4: 24178474-24188473 Medicago truncatula
Medtr4g064813 10.0kb downstream 10.0kb downstream 12116 true chr4: 24188474-24200589 Medicago truncatula
Medtr4g064813 10.0kb downstream 10.0kb downstream 10000 false chr4: 24190590-24200589 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121625028 5273 Angiosperm Singleton cluster - no MSA
122262967 5265 Fabidae Singleton cluster - no MSA
124004155 5270 Rosid Singleton cluster - no MSA
123578271 5271 Pentapetalae Singleton cluster - no MSA
122612981 5272 Eudicot Singleton cluster - no MSA
120897132 5274 Embryophyte Singleton cluster - no MSA
122937787 5275 Viridiplantae Singleton cluster - no MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 31.086     High  
cufflinks 29.912     High  
cufflinks 32.854     High  
cufflinks 11.16     High  
cufflinks 26.069     High  
cufflinks 7.394       Low
cufflinks 11.892     High  
cufflinks 27.964     High  
cufflinks 9.463       Low

0 Strain