Gene : Medtr4g064570 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR22763//PTHR22763:SF42 - RING ZINC FINGER PROTEIN Description:  zinc finger (C3HC4-type RING finger) family protein
Genomic Order:  2884 Name:  ? Medtr4g064570
Secondary Identifier:  ? PAC:31107021
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-7511 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g064570 0.5kb upstream 0.5kb upstream 2313 true chr4: 24096666-24098978 Medicago truncatula
Medtr4g064570 0.5kb upstream 0.5kb upstream 500 false chr4: 24098479-24098978 Medicago truncatula
Medtr4g064570 0.5kb downstream 0.5kb downstream 2313 true chr4: 24096166-24098478 Medicago truncatula
Medtr4g064570 0.5kb downstream 0.5kb downstream 500 false chr4: 24096166-24096665 Medicago truncatula
Medtr4g064570 1.0kb upstream 1.0kb upstream 2813 true chr4: 24096666-24099478 Medicago truncatula
Medtr4g064570 1.0kb upstream 1.0kb upstream 1000 false chr4: 24098479-24099478 Medicago truncatula
Medtr4g064570 1.0kb downstream 1.0kb downstream 2813 true chr4: 24095666-24098478 Medicago truncatula
Medtr4g064570 1.0kb downstream 1.0kb downstream 1000 false chr4: 24095666-24096665 Medicago truncatula
Medtr4g064570 2.0kb upstream 2.0kb upstream 3813 true chr4: 24096666-24100478 Medicago truncatula
Medtr4g064570 2.0kb upstream 2.0kb upstream 2000 false chr4: 24098479-24100478 Medicago truncatula
Medtr4g064570 2.0kb downstream 2.0kb downstream 3813 true chr4: 24094666-24098478 Medicago truncatula
Medtr4g064570 2.0kb downstream 2.0kb downstream 2000 false chr4: 24094666-24096665 Medicago truncatula
Medtr4g064570 5.0kb upstream 5.0kb upstream 6813 true chr4: 24096666-24103478 Medicago truncatula
Medtr4g064570 5.0kb upstream 5.0kb upstream 5000 false chr4: 24098479-24103478 Medicago truncatula
Medtr4g064570 5.0kb downstream 5.0kb downstream 6813 true chr4: 24091666-24098478 Medicago truncatula
Medtr4g064570 5.0kb downstream 5.0kb downstream 5000 false chr4: 24091666-24096665 Medicago truncatula
Medtr4g064570 10.0kb upstream 10.0kb upstream 11813 true chr4: 24096666-24108478 Medicago truncatula
Medtr4g064570 10.0kb upstream 10.0kb upstream 10000 false chr4: 24098479-24108478 Medicago truncatula
Medtr4g064570 10.0kb downstream 10.0kb downstream 11813 true chr4: 24086666-24098478 Medicago truncatula
Medtr4g064570 10.0kb downstream 10.0kb downstream 10000 false chr4: 24086666-24096665 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312857 5265 Fabidae View MSA
124073026 5270 Rosid View MSA
123745848 5271 Pentapetalae View MSA
122795555 5272 Eudicot View MSA
122050385 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121349521 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 144.987     High  
cufflinks 46.051     High Low
cufflinks 90.936     High  
cufflinks 326.192     High High
cufflinks 62.569     High  
cufflinks 141.8     High  
cufflinks 135.116     High  
cufflinks 59.156     High  
cufflinks 268.49     High High

0 Strain