Gene : Medtr4g068550 M. truncatula Mt4.0v1
Defline:  (1 of 130) KOG0157 - Cytochrome P450 CYP4/CYP19/CYP26 subfamilies Description:  fatty acid hydroperoxide lyase
Genomic Order:  3105 Name:  ? Medtr4g068550
Secondary Identifier:  ? PAC:31112772
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g068550 0.5kb upstream 0.5kb upstream 2523 true chr4: 25731461-25733983 Medicago truncatula
Medtr4g068550 0.5kb upstream 0.5kb upstream 500 false chr4: 25731461-25731960 Medicago truncatula
Medtr4g068550 0.5kb downstream 0.5kb downstream 2523 true chr4: 25731961-25734483 Medicago truncatula
Medtr4g068550 0.5kb downstream 0.5kb downstream 500 false chr4: 25733984-25734483 Medicago truncatula
Medtr4g068550 1.0kb upstream 1.0kb upstream 3023 true chr4: 25730961-25733983 Medicago truncatula
Medtr4g068550 1.0kb upstream 1.0kb upstream 1000 false chr4: 25730961-25731960 Medicago truncatula
Medtr4g068550 1.0kb downstream 1.0kb downstream 3023 true chr4: 25731961-25734983 Medicago truncatula
Medtr4g068550 1.0kb downstream 1.0kb downstream 1000 false chr4: 25733984-25734983 Medicago truncatula
Medtr4g068550 2.0kb upstream 2.0kb upstream 4023 true chr4: 25729961-25733983 Medicago truncatula
Medtr4g068550 2.0kb upstream 2.0kb upstream 2000 false chr4: 25729961-25731960 Medicago truncatula
Medtr4g068550 2.0kb downstream 2.0kb downstream 4023 true chr4: 25731961-25735983 Medicago truncatula
Medtr4g068550 2.0kb downstream 2.0kb downstream 2000 false chr4: 25733984-25735983 Medicago truncatula
Medtr4g068550 5.0kb upstream 5.0kb upstream 7023 true chr4: 25726961-25733983 Medicago truncatula
Medtr4g068550 5.0kb upstream 5.0kb upstream 5000 false chr4: 25726961-25731960 Medicago truncatula
Medtr4g068550 5.0kb downstream 5.0kb downstream 7023 true chr4: 25731961-25738983 Medicago truncatula
Medtr4g068550 5.0kb downstream 5.0kb downstream 5000 false chr4: 25733984-25738983 Medicago truncatula
Medtr4g068550 10.0kb upstream 10.0kb upstream 12023 true chr4: 25721961-25733983 Medicago truncatula
Medtr4g068550 10.0kb upstream 10.0kb upstream 10000 false chr4: 25721961-25731960 Medicago truncatula
Medtr4g068550 10.0kb downstream 10.0kb downstream 12023 true chr4: 25731961-25743983 Medicago truncatula
Medtr4g068550 10.0kb downstream 10.0kb downstream 10000 false chr4: 25733984-25743983 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309233 5265 Fabidae View MSA
124071065 5270 Rosid View MSA
123742394 5271 Pentapetalae View MSA
122796213 5272 Eudicot View MSA
122041567 5273 Angiosperm View MSA
121350008 5274 Embryophyte View MSA
123381539 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.027       Low
cufflinks 64.524     High  
cufflinks 58.739     High  
cufflinks 78.049     High  
cufflinks 48.209     High  
cufflinks 50.404     High  
cufflinks 69.065     High  
cufflinks 74.21     High  
cufflinks 261.917     High High

0 Strain