Gene : Medtr4g065200 M. truncatula Mt4.0v1
Defline:  (1 of 3) PF07944 - Beta-L-arabinofuranosidase, GH127 (Glyco_hydro_127) Description:  DUF1680 domain protein
Genomic Order:  2975 Name:  ? Medtr4g065200
Secondary Identifier:  ? PAC:31110695
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g065200 0.5kb upstream 0.5kb upstream 5558 true chr4: 24727577-24733134 Medicago truncatula
Medtr4g065200 0.5kb upstream 0.5kb upstream 500 false chr4: 24727577-24728076 Medicago truncatula
Medtr4g065200 0.5kb downstream 0.5kb downstream 5558 true chr4: 24728077-24733634 Medicago truncatula
Medtr4g065200 0.5kb downstream 0.5kb downstream 500 false chr4: 24733135-24733634 Medicago truncatula
Medtr4g065200 1.0kb upstream 1.0kb upstream 6058 true chr4: 24727077-24733134 Medicago truncatula
Medtr4g065200 1.0kb upstream 1.0kb upstream 1000 false chr4: 24727077-24728076 Medicago truncatula
Medtr4g065200 1.0kb downstream 1.0kb downstream 6058 true chr4: 24728077-24734134 Medicago truncatula
Medtr4g065200 1.0kb downstream 1.0kb downstream 1000 false chr4: 24733135-24734134 Medicago truncatula
Medtr4g065200 2.0kb upstream 2.0kb upstream 7058 true chr4: 24726077-24733134 Medicago truncatula
Medtr4g065200 2.0kb upstream 2.0kb upstream 2000 false chr4: 24726077-24728076 Medicago truncatula
Medtr4g065200 2.0kb downstream 2.0kb downstream 7058 true chr4: 24728077-24735134 Medicago truncatula
Medtr4g065200 2.0kb downstream 2.0kb downstream 2000 false chr4: 24733135-24735134 Medicago truncatula
Medtr4g065200 5.0kb upstream 5.0kb upstream 10058 true chr4: 24723077-24733134 Medicago truncatula
Medtr4g065200 5.0kb upstream 5.0kb upstream 5000 false chr4: 24723077-24728076 Medicago truncatula
Medtr4g065200 5.0kb downstream 5.0kb downstream 10058 true chr4: 24728077-24738134 Medicago truncatula
Medtr4g065200 5.0kb downstream 5.0kb downstream 5000 false chr4: 24733135-24738134 Medicago truncatula
Medtr4g065200 10.0kb upstream 10.0kb upstream 15058 true chr4: 24718077-24733134 Medicago truncatula
Medtr4g065200 10.0kb upstream 10.0kb upstream 10000 false chr4: 24718077-24728076 Medicago truncatula
Medtr4g065200 10.0kb downstream 10.0kb downstream 15058 true chr4: 24728077-24743134 Medicago truncatula
Medtr4g065200 10.0kb downstream 10.0kb downstream 10000 false chr4: 24733135-24743134 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305380 5265 Fabidae View MSA
124065776 5270 Rosid View MSA
123744456 5271 Pentapetalae View MSA
122789821 5272 Eudicot View MSA
122047782 5273 Angiosperm View MSA
121347713 5274 Embryophyte View MSA
123428347 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.34       High
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.035     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.01     Low  
cufflinks 0.006     Low  

0 Strain