Gene : Medtr4g065077 M. truncatula Mt4.0v1
Defline:  (1 of 1) PF03051//PF08246 - Peptidase C1-like family (Peptidase_C1_2) // Cathepsin propeptide inhibitor domain (I29) (Inhibitor_I29) Description:  papain family cysteine protease
Genomic Order:  2935 Name:  ? Medtr4g065077
Secondary Identifier:  ? PAC:31108438
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g065077 0.5kb upstream 0.5kb upstream 2418 true chr4: 24449051-24451468 Medicago truncatula
Medtr4g065077 0.5kb upstream 0.5kb upstream 500 false chr4: 24449051-24449550 Medicago truncatula
Medtr4g065077 0.5kb downstream 0.5kb downstream 2418 true chr4: 24449551-24451968 Medicago truncatula
Medtr4g065077 0.5kb downstream 0.5kb downstream 500 false chr4: 24451469-24451968 Medicago truncatula
Medtr4g065077 1.0kb upstream 1.0kb upstream 2918 true chr4: 24448551-24451468 Medicago truncatula
Medtr4g065077 1.0kb upstream 1.0kb upstream 1000 false chr4: 24448551-24449550 Medicago truncatula
Medtr4g065077 1.0kb downstream 1.0kb downstream 2918 true chr4: 24449551-24452468 Medicago truncatula
Medtr4g065077 1.0kb downstream 1.0kb downstream 1000 false chr4: 24451469-24452468 Medicago truncatula
Medtr4g065077 2.0kb upstream 2.0kb upstream 3918 true chr4: 24447551-24451468 Medicago truncatula
Medtr4g065077 2.0kb upstream 2.0kb upstream 2000 false chr4: 24447551-24449550 Medicago truncatula
Medtr4g065077 2.0kb downstream 2.0kb downstream 3918 true chr4: 24449551-24453468 Medicago truncatula
Medtr4g065077 2.0kb downstream 2.0kb downstream 2000 false chr4: 24451469-24453468 Medicago truncatula
Medtr4g065077 5.0kb upstream 5.0kb upstream 6918 true chr4: 24444551-24451468 Medicago truncatula
Medtr4g065077 5.0kb upstream 5.0kb upstream 5000 false chr4: 24444551-24449550 Medicago truncatula
Medtr4g065077 5.0kb downstream 5.0kb downstream 6918 true chr4: 24449551-24456468 Medicago truncatula
Medtr4g065077 5.0kb downstream 5.0kb downstream 5000 false chr4: 24451469-24456468 Medicago truncatula
Medtr4g065077 10.0kb upstream 10.0kb upstream 11918 true chr4: 24439551-24451468 Medicago truncatula
Medtr4g065077 10.0kb upstream 10.0kb upstream 10000 false chr4: 24439551-24449550 Medicago truncatula
Medtr4g065077 10.0kb downstream 10.0kb downstream 11918 true chr4: 24449551-24461468 Medicago truncatula
Medtr4g065077 10.0kb downstream 10.0kb downstream 10000 false chr4: 24451469-24461468 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121780807 5273 Angiosperm View MSA
122296443 5265 Fabidae View MSA
124035647 5270 Rosid View MSA
123747945 5271 Pentapetalae View MSA
122772367 5272 Eudicot View MSA
121052407 5274 Embryophyte View MSA
123092456 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.333       Low
cufflinks 2.731        
cufflinks 0.845        
cufflinks 2.867        
cufflinks 0.893        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.962        
cufflinks 10.935     High High
cufflinks 2.222        

0 Strain