Gene : Medtr4g065023 M. truncatula Mt4.0v1
Defline:  (1 of 1) 2.8.1.4//2.8.1.7 - Cysteine desulfurase / Cysteine desulfurylase Description:  tRNA-specific 2-thiouridylase MnmA
Genomic Order:  2926 Name:  ? Medtr4g065023
Secondary Identifier:  ? PAC:31110484
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY0-1021 Medicago truncatula pathologic  
Mtruncatula PWY-6823 Medicago truncatula pathologic  
Mtruncatula PWY-7250 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g065023 0.5kb upstream 0.5kb upstream 4519 true chr4: 24369188-24373706 Medicago truncatula
Medtr4g065023 0.5kb upstream 0.5kb upstream 500 false chr4: 24369188-24369687 Medicago truncatula
Medtr4g065023 0.5kb downstream 0.5kb downstream 4519 true chr4: 24369688-24374206 Medicago truncatula
Medtr4g065023 0.5kb downstream 0.5kb downstream 500 false chr4: 24373707-24374206 Medicago truncatula
Medtr4g065023 1.0kb upstream 1.0kb upstream 5019 true chr4: 24368688-24373706 Medicago truncatula
Medtr4g065023 1.0kb upstream 1.0kb upstream 1000 false chr4: 24368688-24369687 Medicago truncatula
Medtr4g065023 1.0kb downstream 1.0kb downstream 5019 true chr4: 24369688-24374706 Medicago truncatula
Medtr4g065023 1.0kb downstream 1.0kb downstream 1000 false chr4: 24373707-24374706 Medicago truncatula
Medtr4g065023 2.0kb upstream 2.0kb upstream 6019 true chr4: 24367688-24373706 Medicago truncatula
Medtr4g065023 2.0kb upstream 2.0kb upstream 2000 false chr4: 24367688-24369687 Medicago truncatula
Medtr4g065023 2.0kb downstream 2.0kb downstream 6019 true chr4: 24369688-24375706 Medicago truncatula
Medtr4g065023 2.0kb downstream 2.0kb downstream 2000 false chr4: 24373707-24375706 Medicago truncatula
Medtr4g065023 5.0kb upstream 5.0kb upstream 9019 true chr4: 24364688-24373706 Medicago truncatula
Medtr4g065023 5.0kb upstream 5.0kb upstream 5000 false chr4: 24364688-24369687 Medicago truncatula
Medtr4g065023 5.0kb downstream 5.0kb downstream 9019 true chr4: 24369688-24378706 Medicago truncatula
Medtr4g065023 5.0kb downstream 5.0kb downstream 5000 false chr4: 24373707-24378706 Medicago truncatula
Medtr4g065023 10.0kb upstream 10.0kb upstream 14019 true chr4: 24359688-24373706 Medicago truncatula
Medtr4g065023 10.0kb upstream 10.0kb upstream 10000 false chr4: 24359688-24369687 Medicago truncatula
Medtr4g065023 10.0kb downstream 10.0kb downstream 14019 true chr4: 24369688-24383706 Medicago truncatula
Medtr4g065023 10.0kb downstream 10.0kb downstream 10000 false chr4: 24373707-24383706 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300417 5265 Fabidae View MSA
124061540 5270 Rosid View MSA
123736557 5271 Pentapetalae View MSA
122792411 5272 Eudicot View MSA
122044530 5273 Angiosperm View MSA
121345192 5274 Embryophyte View MSA
123427133 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.388        
cufflinks 4.132        
cufflinks 9.47       High
cufflinks 1.519        
cufflinks 5.547        
cufflinks 1.108        
cufflinks 1.338        
cufflinks 7.244       High
cufflinks 0.653       Low

0 Strain