Gene : Medtr4g072110 M. truncatula Mt4.0v1
Defline:  (1 of 2) 2.4.2.14 - Amidophosphoribosyltransferase / Phosphoribosyldiphosphate 5-amidotransferase Description:  GLN phosphoribosyl pyrophosphate amidotransferase
Genomic Order:  3332 Name:  ? Medtr4g072110
Secondary Identifier:  ? PAC:31109770
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-6121 Medicago truncatula pathologic  
Mtruncatula PWY-841 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g072110 0.5kb upstream 0.5kb upstream 2724 true chr4: 27355746-27358469 Medicago truncatula
Medtr4g072110 0.5kb upstream 0.5kb upstream 500 false chr4: 27357970-27358469 Medicago truncatula
Medtr4g072110 0.5kb downstream 0.5kb downstream 2724 true chr4: 27355246-27357969 Medicago truncatula
Medtr4g072110 0.5kb downstream 0.5kb downstream 500 false chr4: 27355246-27355745 Medicago truncatula
Medtr4g072110 1.0kb upstream 1.0kb upstream 3224 true chr4: 27355746-27358969 Medicago truncatula
Medtr4g072110 1.0kb upstream 1.0kb upstream 1000 false chr4: 27357970-27358969 Medicago truncatula
Medtr4g072110 1.0kb downstream 1.0kb downstream 3224 true chr4: 27354746-27357969 Medicago truncatula
Medtr4g072110 1.0kb downstream 1.0kb downstream 1000 false chr4: 27354746-27355745 Medicago truncatula
Medtr4g072110 2.0kb upstream 2.0kb upstream 4224 true chr4: 27355746-27359969 Medicago truncatula
Medtr4g072110 2.0kb upstream 2.0kb upstream 2000 false chr4: 27357970-27359969 Medicago truncatula
Medtr4g072110 2.0kb downstream 2.0kb downstream 4224 true chr4: 27353746-27357969 Medicago truncatula
Medtr4g072110 2.0kb downstream 2.0kb downstream 2000 false chr4: 27353746-27355745 Medicago truncatula
Medtr4g072110 5.0kb upstream 5.0kb upstream 7224 true chr4: 27355746-27362969 Medicago truncatula
Medtr4g072110 5.0kb upstream 5.0kb upstream 5000 false chr4: 27357970-27362969 Medicago truncatula
Medtr4g072110 5.0kb downstream 5.0kb downstream 7224 true chr4: 27350746-27357969 Medicago truncatula
Medtr4g072110 5.0kb downstream 5.0kb downstream 5000 false chr4: 27350746-27355745 Medicago truncatula
Medtr4g072110 10.0kb upstream 10.0kb upstream 12224 true chr4: 27355746-27367969 Medicago truncatula
Medtr4g072110 10.0kb upstream 10.0kb upstream 10000 false chr4: 27357970-27367969 Medicago truncatula
Medtr4g072110 10.0kb downstream 10.0kb downstream 12224 true chr4: 27345746-27357969 Medicago truncatula
Medtr4g072110 10.0kb downstream 10.0kb downstream 10000 false chr4: 27345746-27355745 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306069 5265 Fabidae View MSA
124066894 5270 Rosid View MSA
123745700 5271 Pentapetalae View MSA
122790878 5272 Eudicot View MSA
122046645 5273 Angiosperm View MSA
121350725 5274 Embryophyte View MSA
123425714 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.262       Low
cufflinks 74.107     High  
cufflinks 84.451     High High
cufflinks 19.445     High  
cufflinks 100.644     High High
cufflinks 9.496        
cufflinks 8.585        
cufflinks 78.294     High  
cufflinks 13.044     High  

0 Strain