Gene : Medtr4g071370 M. truncatula Mt4.0v1
Defline:  (1 of 5) PTHR11206:SF116 - ENHANCED DISEASE SUSCEPTIBILITY 5-RELATED Description:  MATE efflux family protein
Genomic Order:  3286 Name:  ? Medtr4g071370
Secondary Identifier:  ? PAC:31111467
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g071370 0.5kb upstream 0.5kb upstream 7504 true chr4: 26939989-26947492 Medicago truncatula
Medtr4g071370 0.5kb upstream 0.5kb upstream 500 false chr4: 26946993-26947492 Medicago truncatula
Medtr4g071370 0.5kb downstream 0.5kb downstream 7504 true chr4: 26939489-26946992 Medicago truncatula
Medtr4g071370 0.5kb downstream 0.5kb downstream 500 false chr4: 26939489-26939988 Medicago truncatula
Medtr4g071370 1.0kb upstream 1.0kb upstream 8004 true chr4: 26939989-26947992 Medicago truncatula
Medtr4g071370 1.0kb upstream 1.0kb upstream 1000 false chr4: 26946993-26947992 Medicago truncatula
Medtr4g071370 1.0kb downstream 1.0kb downstream 8004 true chr4: 26938989-26946992 Medicago truncatula
Medtr4g071370 1.0kb downstream 1.0kb downstream 1000 false chr4: 26938989-26939988 Medicago truncatula
Medtr4g071370 2.0kb upstream 2.0kb upstream 9004 true chr4: 26939989-26948992 Medicago truncatula
Medtr4g071370 2.0kb upstream 2.0kb upstream 2000 false chr4: 26946993-26948992 Medicago truncatula
Medtr4g071370 2.0kb downstream 2.0kb downstream 9004 true chr4: 26937989-26946992 Medicago truncatula
Medtr4g071370 2.0kb downstream 2.0kb downstream 2000 false chr4: 26937989-26939988 Medicago truncatula
Medtr4g071370 5.0kb upstream 5.0kb upstream 12004 true chr4: 26939989-26951992 Medicago truncatula
Medtr4g071370 5.0kb upstream 5.0kb upstream 5000 false chr4: 26946993-26951992 Medicago truncatula
Medtr4g071370 5.0kb downstream 5.0kb downstream 12004 true chr4: 26934989-26946992 Medicago truncatula
Medtr4g071370 5.0kb downstream 5.0kb downstream 5000 false chr4: 26934989-26939988 Medicago truncatula
Medtr4g071370 10.0kb upstream 10.0kb upstream 17004 true chr4: 26939989-26956992 Medicago truncatula
Medtr4g071370 10.0kb upstream 10.0kb upstream 10000 false chr4: 26946993-26956992 Medicago truncatula
Medtr4g071370 10.0kb downstream 10.0kb downstream 17004 true chr4: 26929989-26946992 Medicago truncatula
Medtr4g071370 10.0kb downstream 10.0kb downstream 10000 false chr4: 26929989-26939988 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302033 5265 Fabidae View MSA
124073490 5270 Rosid View MSA
123745389 5271 Pentapetalae View MSA
122792728 5272 Eudicot View MSA
122050913 5273 Angiosperm View MSA
121350462 5274 Embryophyte View MSA
123428603 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.749        
cufflinks 0.826        
cufflinks 0.984       High
cufflinks 0.528        
cufflinks 0.889       High
cufflinks 0.446       Low
cufflinks 0.427       Low
cufflinks 0.645        
cufflinks 0.425       Low

0 Strain