Gene : Medtr4g071110 M. truncatula Mt4.0v1
Defline:  (1 of 10) PF05142 - Domain of unknown function (DUF702) (DUF702) Description:  zinc finger, LRP1 type protein
Genomic Order:  3267 Name:  ? Medtr4g071110
Secondary Identifier:  ? PAC:31109739
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g071110 0.5kb upstream 0.5kb upstream 2126 true chr4: 26794245-26796370 Medicago truncatula
Medtr4g071110 0.5kb upstream 0.5kb upstream 500 false chr4: 26795871-26796370 Medicago truncatula
Medtr4g071110 0.5kb downstream 0.5kb downstream 2126 true chr4: 26793745-26795870 Medicago truncatula
Medtr4g071110 0.5kb downstream 0.5kb downstream 500 false chr4: 26793745-26794244 Medicago truncatula
Medtr4g071110 1.0kb upstream 1.0kb upstream 2626 true chr4: 26794245-26796870 Medicago truncatula
Medtr4g071110 1.0kb upstream 1.0kb upstream 1000 false chr4: 26795871-26796870 Medicago truncatula
Medtr4g071110 1.0kb downstream 1.0kb downstream 2626 true chr4: 26793245-26795870 Medicago truncatula
Medtr4g071110 1.0kb downstream 1.0kb downstream 1000 false chr4: 26793245-26794244 Medicago truncatula
Medtr4g071110 2.0kb upstream 2.0kb upstream 3626 true chr4: 26794245-26797870 Medicago truncatula
Medtr4g071110 2.0kb upstream 2.0kb upstream 2000 false chr4: 26795871-26797870 Medicago truncatula
Medtr4g071110 2.0kb downstream 2.0kb downstream 3626 true chr4: 26792245-26795870 Medicago truncatula
Medtr4g071110 2.0kb downstream 2.0kb downstream 2000 false chr4: 26792245-26794244 Medicago truncatula
Medtr4g071110 5.0kb upstream 5.0kb upstream 6626 true chr4: 26794245-26800870 Medicago truncatula
Medtr4g071110 5.0kb upstream 5.0kb upstream 5000 false chr4: 26795871-26800870 Medicago truncatula
Medtr4g071110 5.0kb downstream 5.0kb downstream 6626 true chr4: 26789245-26795870 Medicago truncatula
Medtr4g071110 5.0kb downstream 5.0kb downstream 5000 false chr4: 26789245-26794244 Medicago truncatula
Medtr4g071110 10.0kb upstream 10.0kb upstream 11626 true chr4: 26794245-26805870 Medicago truncatula
Medtr4g071110 10.0kb upstream 10.0kb upstream 10000 false chr4: 26795871-26805870 Medicago truncatula
Medtr4g071110 10.0kb downstream 10.0kb downstream 11626 true chr4: 26784245-26795870 Medicago truncatula
Medtr4g071110 10.0kb downstream 10.0kb downstream 10000 false chr4: 26784245-26794244 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313631 5265 Fabidae View MSA
124064214 5270 Rosid View MSA
123749314 5271 Pentapetalae View MSA
122796752 5272 Eudicot View MSA
122049669 5273 Angiosperm View MSA
121344202 5274 Embryophyte View MSA
123379999 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.081        
cufflinks 0.024     Low  
cufflinks 0.009     Low Low
cufflinks 0.043     Low  
cufflinks 0.027     Low  
cufflinks 0.263       High
cufflinks 0.279       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.245       High

0 Strain