Gene : Medtr4g071660 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR31576:SF2 - TATA BOX-BINDING PROTEIN-ASSOCIATED FACTOR RNA POLYMERASE I SUBUNIT B Description:  TATA box-binding protein associated factor RNA polymerase I subunit B-like protein
Genomic Order:  3310 Name:  ? Medtr4g071660
Secondary Identifier:  ? PAC:31113883
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g071660 0.5kb upstream 0.5kb upstream 4789 true chr4: 27116366-27121154 Medicago truncatula
Medtr4g071660 0.5kb upstream 0.5kb upstream 500 false chr4: 27120655-27121154 Medicago truncatula
Medtr4g071660 0.5kb downstream 0.5kb downstream 4789 true chr4: 27115866-27120654 Medicago truncatula
Medtr4g071660 0.5kb downstream 0.5kb downstream 500 false chr4: 27115866-27116365 Medicago truncatula
Medtr4g071660 1.0kb upstream 1.0kb upstream 5289 true chr4: 27116366-27121654 Medicago truncatula
Medtr4g071660 1.0kb upstream 1.0kb upstream 1000 false chr4: 27120655-27121654 Medicago truncatula
Medtr4g071660 1.0kb downstream 1.0kb downstream 5289 true chr4: 27115366-27120654 Medicago truncatula
Medtr4g071660 1.0kb downstream 1.0kb downstream 1000 false chr4: 27115366-27116365 Medicago truncatula
Medtr4g071660 2.0kb upstream 2.0kb upstream 6289 true chr4: 27116366-27122654 Medicago truncatula
Medtr4g071660 2.0kb upstream 2.0kb upstream 2000 false chr4: 27120655-27122654 Medicago truncatula
Medtr4g071660 2.0kb downstream 2.0kb downstream 6289 true chr4: 27114366-27120654 Medicago truncatula
Medtr4g071660 2.0kb downstream 2.0kb downstream 2000 false chr4: 27114366-27116365 Medicago truncatula
Medtr4g071660 5.0kb upstream 5.0kb upstream 9289 true chr4: 27116366-27125654 Medicago truncatula
Medtr4g071660 5.0kb upstream 5.0kb upstream 5000 false chr4: 27120655-27125654 Medicago truncatula
Medtr4g071660 5.0kb downstream 5.0kb downstream 9289 true chr4: 27111366-27120654 Medicago truncatula
Medtr4g071660 5.0kb downstream 5.0kb downstream 5000 false chr4: 27111366-27116365 Medicago truncatula
Medtr4g071660 10.0kb upstream 10.0kb upstream 14289 true chr4: 27116366-27130654 Medicago truncatula
Medtr4g071660 10.0kb upstream 10.0kb upstream 10000 false chr4: 27120655-27130654 Medicago truncatula
Medtr4g071660 10.0kb downstream 10.0kb downstream 14289 true chr4: 27106366-27120654 Medicago truncatula
Medtr4g071660 10.0kb downstream 10.0kb downstream 10000 false chr4: 27106366-27116365 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306407 5265 Fabidae View MSA
124065937 5270 Rosid View MSA
123742102 5271 Pentapetalae View MSA
122796533 5272 Eudicot View MSA
122050673 5273 Angiosperm View MSA
121345414 5274 Embryophyte View MSA
123427215 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.894        
cufflinks 0.974        
cufflinks 0.984        
cufflinks 0.204       Low
cufflinks 1.381       High
cufflinks 0.453        
cufflinks 0.663        
cufflinks 0.942        
cufflinks 0.421        

0 Strain