Gene : Medtr4g071540 M. truncatula Mt4.0v1
Defline:  (1 of 1) PF03114//PF14604 - BAR domain (BAR) // Variant SH3 domain (SH3_9) Description:  clathrin-binding protein, putative
Genomic Order:  3298 Name:  ? Medtr4g071540
Secondary Identifier:  ? PAC:31106906
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g071540 0.5kb upstream 0.5kb upstream 4254 true chr4: 27041286-27045539 Medicago truncatula
Medtr4g071540 0.5kb upstream 0.5kb upstream 500 false chr4: 27045040-27045539 Medicago truncatula
Medtr4g071540 0.5kb downstream 0.5kb downstream 4254 true chr4: 27040786-27045039 Medicago truncatula
Medtr4g071540 0.5kb downstream 0.5kb downstream 500 false chr4: 27040786-27041285 Medicago truncatula
Medtr4g071540 1.0kb upstream 1.0kb upstream 4754 true chr4: 27041286-27046039 Medicago truncatula
Medtr4g071540 1.0kb upstream 1.0kb upstream 1000 false chr4: 27045040-27046039 Medicago truncatula
Medtr4g071540 1.0kb downstream 1.0kb downstream 4754 true chr4: 27040286-27045039 Medicago truncatula
Medtr4g071540 1.0kb downstream 1.0kb downstream 1000 false chr4: 27040286-27041285 Medicago truncatula
Medtr4g071540 2.0kb upstream 2.0kb upstream 5754 true chr4: 27041286-27047039 Medicago truncatula
Medtr4g071540 2.0kb upstream 2.0kb upstream 2000 false chr4: 27045040-27047039 Medicago truncatula
Medtr4g071540 2.0kb downstream 2.0kb downstream 5754 true chr4: 27039286-27045039 Medicago truncatula
Medtr4g071540 2.0kb downstream 2.0kb downstream 2000 false chr4: 27039286-27041285 Medicago truncatula
Medtr4g071540 5.0kb upstream 5.0kb upstream 8754 true chr4: 27041286-27050039 Medicago truncatula
Medtr4g071540 5.0kb upstream 5.0kb upstream 5000 false chr4: 27045040-27050039 Medicago truncatula
Medtr4g071540 5.0kb downstream 5.0kb downstream 8754 true chr4: 27036286-27045039 Medicago truncatula
Medtr4g071540 5.0kb downstream 5.0kb downstream 5000 false chr4: 27036286-27041285 Medicago truncatula
Medtr4g071540 10.0kb upstream 10.0kb upstream 13754 true chr4: 27041286-27055039 Medicago truncatula
Medtr4g071540 10.0kb upstream 10.0kb upstream 10000 false chr4: 27045040-27055039 Medicago truncatula
Medtr4g071540 10.0kb downstream 10.0kb downstream 13754 true chr4: 27031286-27045039 Medicago truncatula
Medtr4g071540 10.0kb downstream 10.0kb downstream 10000 false chr4: 27031286-27041285 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298030 5265 Fabidae View MSA
124068234 5270 Rosid View MSA
123743679 5271 Pentapetalae View MSA
122794557 5272 Eudicot View MSA
122046082 5273 Angiosperm View MSA
121348506 5274 Embryophyte View MSA
123380886 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.461        
cufflinks 2.748        
cufflinks 2.413        
cufflinks 1.659        
cufflinks 2.821        
cufflinks 1.048       Low
cufflinks 2.292        
cufflinks 2.063        
cufflinks 2.862        

0 Strain