Gene : Medtr4g058950 M. truncatula Mt4.0v1
Defline:  (1 of 41) PF04535 - Domain of unknown function (DUF588) (DUF588) Description:  CASP-like protein
Genomic Order:  2576 Name:  ? Medtr4g058950
Secondary Identifier:  ? PAC:31106535
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g058950 0.5kb upstream 0.5kb upstream 6221 true chr4: 21730113-21736333 Medicago truncatula
Medtr4g058950 0.5kb upstream 0.5kb upstream 500 false chr4: 21730113-21730612 Medicago truncatula
Medtr4g058950 0.5kb downstream 0.5kb downstream 6221 true chr4: 21730613-21736833 Medicago truncatula
Medtr4g058950 0.5kb downstream 0.5kb downstream 500 false chr4: 21736334-21736833 Medicago truncatula
Medtr4g058950 1.0kb upstream 1.0kb upstream 6721 true chr4: 21729613-21736333 Medicago truncatula
Medtr4g058950 1.0kb upstream 1.0kb upstream 1000 false chr4: 21729613-21730612 Medicago truncatula
Medtr4g058950 1.0kb downstream 1.0kb downstream 6721 true chr4: 21730613-21737333 Medicago truncatula
Medtr4g058950 1.0kb downstream 1.0kb downstream 1000 false chr4: 21736334-21737333 Medicago truncatula
Medtr4g058950 2.0kb upstream 2.0kb upstream 7721 true chr4: 21728613-21736333 Medicago truncatula
Medtr4g058950 2.0kb upstream 2.0kb upstream 2000 false chr4: 21728613-21730612 Medicago truncatula
Medtr4g058950 2.0kb downstream 2.0kb downstream 7721 true chr4: 21730613-21738333 Medicago truncatula
Medtr4g058950 2.0kb downstream 2.0kb downstream 2000 false chr4: 21736334-21738333 Medicago truncatula
Medtr4g058950 5.0kb upstream 5.0kb upstream 10721 true chr4: 21725613-21736333 Medicago truncatula
Medtr4g058950 5.0kb upstream 5.0kb upstream 5000 false chr4: 21725613-21730612 Medicago truncatula
Medtr4g058950 5.0kb downstream 5.0kb downstream 10721 true chr4: 21730613-21741333 Medicago truncatula
Medtr4g058950 5.0kb downstream 5.0kb downstream 5000 false chr4: 21736334-21741333 Medicago truncatula
Medtr4g058950 10.0kb upstream 10.0kb upstream 15721 true chr4: 21720613-21736333 Medicago truncatula
Medtr4g058950 10.0kb upstream 10.0kb upstream 10000 false chr4: 21720613-21730612 Medicago truncatula
Medtr4g058950 10.0kb downstream 10.0kb downstream 15721 true chr4: 21730613-21746333 Medicago truncatula
Medtr4g058950 10.0kb downstream 10.0kb downstream 10000 false chr4: 21736334-21746333 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027815 5273 Angiosperm View MSA
122306401 5265 Fabidae View MSA
124069291 5270 Rosid View MSA
123747778 5271 Pentapetalae View MSA
122796874 5272 Eudicot View MSA
121349907 5274 Embryophyte View MSA
123381495 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.325       Low
cufflinks 2.917        
cufflinks 2.761        
cufflinks 3.948       High
cufflinks 2.779        
cufflinks 2.653        
cufflinks 3.264        
cufflinks 2.47        
cufflinks 4.731       High

0 Strain