Gene : Medtr4g059560 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR24347:SF1 - PROTEIN CKK-1, ISOFORM B Description:  Serine/Threonine kinase family protein
Genomic Order:  2605 Name:  ? Medtr4g059560
Secondary Identifier:  ? PAC:31106670
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g059560 0.5kb upstream 0.5kb upstream 6045 true chr4: 21948672-21954716 Medicago truncatula
Medtr4g059560 0.5kb upstream 0.5kb upstream 500 false chr4: 21954217-21954716 Medicago truncatula
Medtr4g059560 0.5kb downstream 0.5kb downstream 6045 true chr4: 21948172-21954216 Medicago truncatula
Medtr4g059560 0.5kb downstream 0.5kb downstream 500 false chr4: 21948172-21948671 Medicago truncatula
Medtr4g059560 1.0kb upstream 1.0kb upstream 6545 true chr4: 21948672-21955216 Medicago truncatula
Medtr4g059560 1.0kb upstream 1.0kb upstream 1000 false chr4: 21954217-21955216 Medicago truncatula
Medtr4g059560 1.0kb downstream 1.0kb downstream 6545 true chr4: 21947672-21954216 Medicago truncatula
Medtr4g059560 1.0kb downstream 1.0kb downstream 1000 false chr4: 21947672-21948671 Medicago truncatula
Medtr4g059560 2.0kb upstream 2.0kb upstream 7545 true chr4: 21948672-21956216 Medicago truncatula
Medtr4g059560 2.0kb upstream 2.0kb upstream 2000 false chr4: 21954217-21956216 Medicago truncatula
Medtr4g059560 2.0kb downstream 2.0kb downstream 7545 true chr4: 21946672-21954216 Medicago truncatula
Medtr4g059560 2.0kb downstream 2.0kb downstream 2000 false chr4: 21946672-21948671 Medicago truncatula
Medtr4g059560 5.0kb upstream 5.0kb upstream 10545 true chr4: 21948672-21959216 Medicago truncatula
Medtr4g059560 5.0kb upstream 5.0kb upstream 5000 false chr4: 21954217-21959216 Medicago truncatula
Medtr4g059560 5.0kb downstream 5.0kb downstream 10545 true chr4: 21943672-21954216 Medicago truncatula
Medtr4g059560 5.0kb downstream 5.0kb downstream 5000 false chr4: 21943672-21948671 Medicago truncatula
Medtr4g059560 10.0kb upstream 10.0kb upstream 15545 true chr4: 21948672-21964216 Medicago truncatula
Medtr4g059560 10.0kb upstream 10.0kb upstream 10000 false chr4: 21954217-21964216 Medicago truncatula
Medtr4g059560 10.0kb downstream 10.0kb downstream 15545 true chr4: 21938672-21954216 Medicago truncatula
Medtr4g059560 10.0kb downstream 10.0kb downstream 10000 false chr4: 21938672-21948671 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309675 5265 Fabidae View MSA
124062424 5270 Rosid View MSA
123753521 5271 Pentapetalae View MSA
122797928 5272 Eudicot View MSA
122051434 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.619        
cufflinks 2.058        
cufflinks 2.352        
cufflinks 0.661        
cufflinks 2.937       High
cufflinks 0.353       Low
cufflinks 1.405        
cufflinks 1.739        
cufflinks 1.021        

0 Strain