Gene : Medtr4g057970 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11353:SF11 - CHAPERONIN 60 SUBUNIT ALPHA 1, CHLOROPLASTIC Description:  ruBisCO large subunit-binding protein protein
Genomic Order:  2540 Name:  ? Medtr4g057970
Secondary Identifier:  ? PAC:31115247
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g057970 0.5kb upstream 0.5kb upstream 4508 true chr4: 21466740-21471247 Medicago truncatula
Medtr4g057970 0.5kb upstream 0.5kb upstream 500 false chr4: 21470748-21471247 Medicago truncatula
Medtr4g057970 0.5kb downstream 0.5kb downstream 4508 true chr4: 21466240-21470747 Medicago truncatula
Medtr4g057970 0.5kb downstream 0.5kb downstream 500 false chr4: 21466240-21466739 Medicago truncatula
Medtr4g057970 1.0kb upstream 1.0kb upstream 5008 true chr4: 21466740-21471747 Medicago truncatula
Medtr4g057970 1.0kb upstream 1.0kb upstream 1000 false chr4: 21470748-21471747 Medicago truncatula
Medtr4g057970 1.0kb downstream 1.0kb downstream 5008 true chr4: 21465740-21470747 Medicago truncatula
Medtr4g057970 1.0kb downstream 1.0kb downstream 1000 false chr4: 21465740-21466739 Medicago truncatula
Medtr4g057970 2.0kb upstream 2.0kb upstream 6008 true chr4: 21466740-21472747 Medicago truncatula
Medtr4g057970 2.0kb upstream 2.0kb upstream 2000 false chr4: 21470748-21472747 Medicago truncatula
Medtr4g057970 2.0kb downstream 2.0kb downstream 6008 true chr4: 21464740-21470747 Medicago truncatula
Medtr4g057970 2.0kb downstream 2.0kb downstream 2000 false chr4: 21464740-21466739 Medicago truncatula
Medtr4g057970 5.0kb upstream 5.0kb upstream 9008 true chr4: 21466740-21475747 Medicago truncatula
Medtr4g057970 5.0kb upstream 5.0kb upstream 5000 false chr4: 21470748-21475747 Medicago truncatula
Medtr4g057970 5.0kb downstream 5.0kb downstream 9008 true chr4: 21461740-21470747 Medicago truncatula
Medtr4g057970 5.0kb downstream 5.0kb downstream 5000 false chr4: 21461740-21466739 Medicago truncatula
Medtr4g057970 10.0kb upstream 10.0kb upstream 14008 true chr4: 21466740-21480747 Medicago truncatula
Medtr4g057970 10.0kb upstream 10.0kb upstream 10000 false chr4: 21470748-21480747 Medicago truncatula
Medtr4g057970 10.0kb downstream 10.0kb downstream 14008 true chr4: 21456740-21470747 Medicago truncatula
Medtr4g057970 10.0kb downstream 10.0kb downstream 10000 false chr4: 21456740-21466739 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301979 5265 Fabidae View MSA
124066772 5270 Rosid View MSA
123747305 5271 Pentapetalae View MSA
122795365 5272 Eudicot View MSA
122048196 5273 Angiosperm View MSA
121346372 5274 Embryophyte View MSA
123427883 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.109     High  
cufflinks 75.781     High  
cufflinks 59.792     High  
cufflinks 9.502     High  
cufflinks 127.514     High High
cufflinks 1.95       Low
cufflinks 9.458        
cufflinks 101.606     High High
cufflinks 16.394     High  

0 Strain