Gene : Medtr4g061080 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12606:SF15 - NEDD8-SPECIFIC PROTEASE 1 Description:  Ulp1 protease family, carboxy-terminal domain protein
Genomic Order:  2683 Name:  ? Medtr4g061080
Secondary Identifier:  ? PAC:31106529
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g061080 0.5kb upstream 0.5kb upstream 2656 true chr4: 22537518-22540173 Medicago truncatula
Medtr4g061080 0.5kb upstream 0.5kb upstream 500 false chr4: 22539674-22540173 Medicago truncatula
Medtr4g061080 0.5kb downstream 0.5kb downstream 2656 true chr4: 22537018-22539673 Medicago truncatula
Medtr4g061080 0.5kb downstream 0.5kb downstream 500 false chr4: 22537018-22537517 Medicago truncatula
Medtr4g061080 1.0kb upstream 1.0kb upstream 3156 true chr4: 22537518-22540673 Medicago truncatula
Medtr4g061080 1.0kb upstream 1.0kb upstream 1000 false chr4: 22539674-22540673 Medicago truncatula
Medtr4g061080 1.0kb downstream 1.0kb downstream 3156 true chr4: 22536518-22539673 Medicago truncatula
Medtr4g061080 1.0kb downstream 1.0kb downstream 1000 false chr4: 22536518-22537517 Medicago truncatula
Medtr4g061080 2.0kb upstream 2.0kb upstream 4156 true chr4: 22537518-22541673 Medicago truncatula
Medtr4g061080 2.0kb upstream 2.0kb upstream 2000 false chr4: 22539674-22541673 Medicago truncatula
Medtr4g061080 2.0kb downstream 2.0kb downstream 4156 true chr4: 22535518-22539673 Medicago truncatula
Medtr4g061080 2.0kb downstream 2.0kb downstream 2000 false chr4: 22535518-22537517 Medicago truncatula
Medtr4g061080 5.0kb upstream 5.0kb upstream 7156 true chr4: 22537518-22544673 Medicago truncatula
Medtr4g061080 5.0kb upstream 5.0kb upstream 5000 false chr4: 22539674-22544673 Medicago truncatula
Medtr4g061080 5.0kb downstream 5.0kb downstream 7156 true chr4: 22532518-22539673 Medicago truncatula
Medtr4g061080 5.0kb downstream 5.0kb downstream 5000 false chr4: 22532518-22537517 Medicago truncatula
Medtr4g061080 10.0kb upstream 10.0kb upstream 12156 true chr4: 22537518-22549673 Medicago truncatula
Medtr4g061080 10.0kb upstream 10.0kb upstream 10000 false chr4: 22539674-22549673 Medicago truncatula
Medtr4g061080 10.0kb downstream 10.0kb downstream 12156 true chr4: 22527518-22539673 Medicago truncatula
Medtr4g061080 10.0kb downstream 10.0kb downstream 10000 false chr4: 22527518-22537517 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303778 5265 Fabidae View MSA
124065120 5270 Rosid View MSA
123744954 5271 Pentapetalae View MSA
122791121 5272 Eudicot View MSA
122044999 5273 Angiosperm View MSA
121348987 5274 Embryophyte View MSA
123428480 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.506        
cufflinks 3.966        
cufflinks 3.921        
cufflinks 10.083     High High
cufflinks 4.732        
cufflinks 4.038        
cufflinks 6.822        
cufflinks 3.589       Low
cufflinks 6.868        

0 Strain