Gene : Medtr4g061800 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR19376:SF32 - DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC1 Description:  DNA-directed RNA polymerase I protein
Genomic Order:  2717 Name:  ? Medtr4g061800
Secondary Identifier:  ? PAC:31111031
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g061800 0.5kb upstream 0.5kb upstream 23653 true chr4: 22852950-22876602 Medicago truncatula
Medtr4g061800 0.5kb upstream 0.5kb upstream 500 false chr4: 22876103-22876602 Medicago truncatula
Medtr4g061800 0.5kb downstream 0.5kb downstream 23653 true chr4: 22852450-22876102 Medicago truncatula
Medtr4g061800 0.5kb downstream 0.5kb downstream 500 false chr4: 22852450-22852949 Medicago truncatula
Medtr4g061800 1.0kb upstream 1.0kb upstream 24153 true chr4: 22852950-22877102 Medicago truncatula
Medtr4g061800 1.0kb upstream 1.0kb upstream 1000 false chr4: 22876103-22877102 Medicago truncatula
Medtr4g061800 1.0kb downstream 1.0kb downstream 24153 true chr4: 22851950-22876102 Medicago truncatula
Medtr4g061800 1.0kb downstream 1.0kb downstream 1000 false chr4: 22851950-22852949 Medicago truncatula
Medtr4g061800 2.0kb upstream 2.0kb upstream 25153 true chr4: 22852950-22878102 Medicago truncatula
Medtr4g061800 2.0kb upstream 2.0kb upstream 2000 false chr4: 22876103-22878102 Medicago truncatula
Medtr4g061800 2.0kb downstream 2.0kb downstream 25153 true chr4: 22850950-22876102 Medicago truncatula
Medtr4g061800 2.0kb downstream 2.0kb downstream 2000 false chr4: 22850950-22852949 Medicago truncatula
Medtr4g061800 5.0kb upstream 5.0kb upstream 28153 true chr4: 22852950-22881102 Medicago truncatula
Medtr4g061800 5.0kb upstream 5.0kb upstream 5000 false chr4: 22876103-22881102 Medicago truncatula
Medtr4g061800 5.0kb downstream 5.0kb downstream 28153 true chr4: 22847950-22876102 Medicago truncatula
Medtr4g061800 5.0kb downstream 5.0kb downstream 5000 false chr4: 22847950-22852949 Medicago truncatula
Medtr4g061800 10.0kb upstream 10.0kb upstream 33153 true chr4: 22852950-22886102 Medicago truncatula
Medtr4g061800 10.0kb upstream 10.0kb upstream 10000 false chr4: 22876103-22886102 Medicago truncatula
Medtr4g061800 10.0kb downstream 10.0kb downstream 33153 true chr4: 22842950-22876102 Medicago truncatula
Medtr4g061800 10.0kb downstream 10.0kb downstream 10000 false chr4: 22842950-22852949 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041213 5273 Angiosperm View MSA
122298997 5265 Fabidae View MSA
124067709 5270 Rosid View MSA
123749411 5271 Pentapetalae View MSA
122792408 5272 Eudicot View MSA
121346672 5274 Embryophyte View MSA
123424215 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.127        
cufflinks 0.074        
cufflinks 0.122        
cufflinks 0.026     Low Low
cufflinks 0.223       High
cufflinks 0.062     Low  
cufflinks 0.035     Low  
cufflinks 0.07        
cufflinks 0.032     Low Low

0 Strain