Gene : Medtr4g059790 M. truncatula Mt4.0v1
Defline:  (1 of 14) PTHR32077:SF7 - FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 11 Description:  fasciclin-like arabinogalactan protein
Genomic Order:  2617 Name:  ? Medtr4g059790
Secondary Identifier:  ? PAC:31106555
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g059790 0.5kb upstream 0.5kb upstream 1715 true chr4: 22058538-22060252 Medicago truncatula
Medtr4g059790 0.5kb upstream 0.5kb upstream 500 false chr4: 22058538-22059037 Medicago truncatula
Medtr4g059790 0.5kb downstream 0.5kb downstream 1715 true chr4: 22059038-22060752 Medicago truncatula
Medtr4g059790 0.5kb downstream 0.5kb downstream 500 false chr4: 22060253-22060752 Medicago truncatula
Medtr4g059790 1.0kb upstream 1.0kb upstream 2215 true chr4: 22058038-22060252 Medicago truncatula
Medtr4g059790 1.0kb upstream 1.0kb upstream 1000 false chr4: 22058038-22059037 Medicago truncatula
Medtr4g059790 1.0kb downstream 1.0kb downstream 2215 true chr4: 22059038-22061252 Medicago truncatula
Medtr4g059790 1.0kb downstream 1.0kb downstream 1000 false chr4: 22060253-22061252 Medicago truncatula
Medtr4g059790 2.0kb upstream 2.0kb upstream 3215 true chr4: 22057038-22060252 Medicago truncatula
Medtr4g059790 2.0kb upstream 2.0kb upstream 2000 false chr4: 22057038-22059037 Medicago truncatula
Medtr4g059790 2.0kb downstream 2.0kb downstream 3215 true chr4: 22059038-22062252 Medicago truncatula
Medtr4g059790 2.0kb downstream 2.0kb downstream 2000 false chr4: 22060253-22062252 Medicago truncatula
Medtr4g059790 5.0kb upstream 5.0kb upstream 6215 true chr4: 22054038-22060252 Medicago truncatula
Medtr4g059790 5.0kb upstream 5.0kb upstream 5000 false chr4: 22054038-22059037 Medicago truncatula
Medtr4g059790 5.0kb downstream 5.0kb downstream 6215 true chr4: 22059038-22065252 Medicago truncatula
Medtr4g059790 5.0kb downstream 5.0kb downstream 5000 false chr4: 22060253-22065252 Medicago truncatula
Medtr4g059790 10.0kb upstream 10.0kb upstream 11215 true chr4: 22049038-22060252 Medicago truncatula
Medtr4g059790 10.0kb upstream 10.0kb upstream 10000 false chr4: 22049038-22059037 Medicago truncatula
Medtr4g059790 10.0kb downstream 10.0kb downstream 11215 true chr4: 22059038-22070252 Medicago truncatula
Medtr4g059790 10.0kb downstream 10.0kb downstream 10000 false chr4: 22060253-22070252 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122031651 5273 Angiosperm View MSA
122297659 5265 Fabidae View MSA
124075064 5270 Rosid View MSA
123628735 5271 Pentapetalae View MSA
122662989 5272 Eudicot View MSA
121300660 5274 Embryophyte View MSA
123338397 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.499       Low
cufflinks 0.344       Low
cufflinks 16.241     High High
cufflinks 8.618        
cufflinks 1.046        
cufflinks 2.829        
cufflinks 1.723        
cufflinks 17.546     High High

0 Strain