Gene : Medtr4g059780 M. truncatula Mt4.0v1
Defline:  (1 of 14) PTHR32077:SF7 - FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 11 Description:  fasciclin domain protein
Genomic Order:  2616 Name:  ? Medtr4g059780
Secondary Identifier:  ? PAC:31112402
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g059780 0.5kb upstream 0.5kb upstream 1592 true chr4: 22055318-22056909 Medicago truncatula
Medtr4g059780 0.5kb upstream 0.5kb upstream 500 false chr4: 22055318-22055817 Medicago truncatula
Medtr4g059780 0.5kb downstream 0.5kb downstream 1592 true chr4: 22055818-22057409 Medicago truncatula
Medtr4g059780 0.5kb downstream 0.5kb downstream 500 false chr4: 22056910-22057409 Medicago truncatula
Medtr4g059780 1.0kb upstream 1.0kb upstream 2092 true chr4: 22054818-22056909 Medicago truncatula
Medtr4g059780 1.0kb upstream 1.0kb upstream 1000 false chr4: 22054818-22055817 Medicago truncatula
Medtr4g059780 1.0kb downstream 1.0kb downstream 2092 true chr4: 22055818-22057909 Medicago truncatula
Medtr4g059780 1.0kb downstream 1.0kb downstream 1000 false chr4: 22056910-22057909 Medicago truncatula
Medtr4g059780 2.0kb upstream 2.0kb upstream 3092 true chr4: 22053818-22056909 Medicago truncatula
Medtr4g059780 2.0kb upstream 2.0kb upstream 2000 false chr4: 22053818-22055817 Medicago truncatula
Medtr4g059780 2.0kb downstream 2.0kb downstream 3092 true chr4: 22055818-22058909 Medicago truncatula
Medtr4g059780 2.0kb downstream 2.0kb downstream 2000 false chr4: 22056910-22058909 Medicago truncatula
Medtr4g059780 5.0kb upstream 5.0kb upstream 6092 true chr4: 22050818-22056909 Medicago truncatula
Medtr4g059780 5.0kb upstream 5.0kb upstream 5000 false chr4: 22050818-22055817 Medicago truncatula
Medtr4g059780 5.0kb downstream 5.0kb downstream 6092 true chr4: 22055818-22061909 Medicago truncatula
Medtr4g059780 5.0kb downstream 5.0kb downstream 5000 false chr4: 22056910-22061909 Medicago truncatula
Medtr4g059780 10.0kb upstream 10.0kb upstream 11092 true chr4: 22045818-22056909 Medicago truncatula
Medtr4g059780 10.0kb upstream 10.0kb upstream 10000 false chr4: 22045818-22055817 Medicago truncatula
Medtr4g059780 10.0kb downstream 10.0kb downstream 11092 true chr4: 22055818-22066909 Medicago truncatula
Medtr4g059780 10.0kb downstream 10.0kb downstream 10000 false chr4: 22056910-22066909 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297718 5265 Fabidae View MSA
124062228 5270 Rosid View MSA
123750165 5271 Pentapetalae View MSA
122791630 5272 Eudicot View MSA
122047379 5273 Angiosperm View MSA
121351509 5274 Embryophyte View MSA
123426561 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.05     Low Low
cufflinks 0.514        
cufflinks 0.233        
cufflinks 13.068     High High
cufflinks 5.018        
cufflinks 0.404        
cufflinks 1.898        
cufflinks 1.271        
cufflinks 12.175     High High

0 Strain