Gene : Medtr4g066650 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR11685:SF135 - E3 UBIQUITIN-PROTEIN LIGASE ARI10-RELATED Description:  E3 ubiquitin-protein ligase ARI7, putative
Genomic Order:  3029 Name:  ? Medtr4g066650
Secondary Identifier:  ? PAC:31109159
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-7511 Medicago truncatula pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g066650 0.5kb upstream 0.5kb upstream 8100 true chr4: 25204724-25212823 Medicago truncatula
Medtr4g066650 0.5kb upstream 0.5kb upstream 500 false chr4: 25204724-25205223 Medicago truncatula
Medtr4g066650 0.5kb downstream 0.5kb downstream 8100 true chr4: 25205224-25213323 Medicago truncatula
Medtr4g066650 0.5kb downstream 0.5kb downstream 500 false chr4: 25212824-25213323 Medicago truncatula
Medtr4g066650 1.0kb upstream 1.0kb upstream 8600 true chr4: 25204224-25212823 Medicago truncatula
Medtr4g066650 1.0kb upstream 1.0kb upstream 1000 false chr4: 25204224-25205223 Medicago truncatula
Medtr4g066650 1.0kb downstream 1.0kb downstream 8600 true chr4: 25205224-25213823 Medicago truncatula
Medtr4g066650 1.0kb downstream 1.0kb downstream 1000 false chr4: 25212824-25213823 Medicago truncatula
Medtr4g066650 2.0kb upstream 2.0kb upstream 9600 true chr4: 25203224-25212823 Medicago truncatula
Medtr4g066650 2.0kb upstream 2.0kb upstream 2000 false chr4: 25203224-25205223 Medicago truncatula
Medtr4g066650 2.0kb downstream 2.0kb downstream 9600 true chr4: 25205224-25214823 Medicago truncatula
Medtr4g066650 2.0kb downstream 2.0kb downstream 2000 false chr4: 25212824-25214823 Medicago truncatula
Medtr4g066650 5.0kb upstream 5.0kb upstream 12600 true chr4: 25200224-25212823 Medicago truncatula
Medtr4g066650 5.0kb upstream 5.0kb upstream 5000 false chr4: 25200224-25205223 Medicago truncatula
Medtr4g066650 5.0kb downstream 5.0kb downstream 12600 true chr4: 25205224-25217823 Medicago truncatula
Medtr4g066650 5.0kb downstream 5.0kb downstream 5000 false chr4: 25212824-25217823 Medicago truncatula
Medtr4g066650 10.0kb upstream 10.0kb upstream 17600 true chr4: 25195224-25212823 Medicago truncatula
Medtr4g066650 10.0kb upstream 10.0kb upstream 10000 false chr4: 25195224-25205223 Medicago truncatula
Medtr4g066650 10.0kb downstream 10.0kb downstream 17600 true chr4: 25205224-25222823 Medicago truncatula
Medtr4g066650 10.0kb downstream 10.0kb downstream 10000 false chr4: 25212824-25222823 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314915 5265 Fabidae View MSA
124071269 5270 Rosid View MSA
123742457 5271 Pentapetalae View MSA
122787924 5272 Eudicot View MSA
122045508 5273 Angiosperm View MSA
121343931 5274 Embryophyte View MSA
123428000 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.964     High  
cufflinks 13.979     High  
cufflinks 26.105     High High
cufflinks 10.588     High Low
cufflinks 13.18     High  
cufflinks 9.641       Low
cufflinks 17.18     High  
cufflinks 18.287     High  
cufflinks 11.093     High  

0 Strain