Gene : Medtr4g066660 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR24349:SF160 - CALCIUM-DEPENDENT PROTEIN KINASE 24 Description:  calmodulin-domain kinase CDPK protein
Genomic Order:  3030 Name:  ? Medtr4g066660
Secondary Identifier:  ? PAC:31111529
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g066660 0.5kb upstream 0.5kb upstream 3942 true chr4: 25213655-25217596 Medicago truncatula
Medtr4g066660 0.5kb upstream 0.5kb upstream 500 false chr4: 25213655-25214154 Medicago truncatula
Medtr4g066660 0.5kb downstream 0.5kb downstream 3942 true chr4: 25214155-25218096 Medicago truncatula
Medtr4g066660 0.5kb downstream 0.5kb downstream 500 false chr4: 25217597-25218096 Medicago truncatula
Medtr4g066660 1.0kb upstream 1.0kb upstream 4442 true chr4: 25213155-25217596 Medicago truncatula
Medtr4g066660 1.0kb upstream 1.0kb upstream 1000 false chr4: 25213155-25214154 Medicago truncatula
Medtr4g066660 1.0kb downstream 1.0kb downstream 4442 true chr4: 25214155-25218596 Medicago truncatula
Medtr4g066660 1.0kb downstream 1.0kb downstream 1000 false chr4: 25217597-25218596 Medicago truncatula
Medtr4g066660 2.0kb upstream 2.0kb upstream 5442 true chr4: 25212155-25217596 Medicago truncatula
Medtr4g066660 2.0kb upstream 2.0kb upstream 2000 false chr4: 25212155-25214154 Medicago truncatula
Medtr4g066660 2.0kb downstream 2.0kb downstream 5442 true chr4: 25214155-25219596 Medicago truncatula
Medtr4g066660 2.0kb downstream 2.0kb downstream 2000 false chr4: 25217597-25219596 Medicago truncatula
Medtr4g066660 5.0kb upstream 5.0kb upstream 8442 true chr4: 25209155-25217596 Medicago truncatula
Medtr4g066660 5.0kb upstream 5.0kb upstream 5000 false chr4: 25209155-25214154 Medicago truncatula
Medtr4g066660 5.0kb downstream 5.0kb downstream 8442 true chr4: 25214155-25222596 Medicago truncatula
Medtr4g066660 5.0kb downstream 5.0kb downstream 5000 false chr4: 25217597-25222596 Medicago truncatula
Medtr4g066660 10.0kb upstream 10.0kb upstream 13442 true chr4: 25204155-25217596 Medicago truncatula
Medtr4g066660 10.0kb upstream 10.0kb upstream 10000 false chr4: 25204155-25214154 Medicago truncatula
Medtr4g066660 10.0kb downstream 10.0kb downstream 13442 true chr4: 25214155-25227596 Medicago truncatula
Medtr4g066660 10.0kb downstream 10.0kb downstream 10000 false chr4: 25217597-25227596 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779275 5273 Angiosperm View MSA
122301214 5265 Fabidae View MSA
124066973 5270 Rosid View MSA
123741772 5271 Pentapetalae View MSA
122770123 5272 Eudicot View MSA
121050948 5274 Embryophyte View MSA
123091056 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.004     Low Low
cufflinks 0.009     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.009     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain