Gene : Medtr4g049420 M. truncatula Mt4.0v1
Description:  transmembrane protein, putative Genomic Order:  2031
Name:  ? Medtr4g049420 Secondary Identifier:  ? PAC:31108079
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g049420 0.5kb upstream 0.5kb upstream 1669 true chr4: 17367637-17369305 Medicago truncatula
Medtr4g049420 0.5kb upstream 0.5kb upstream 500 false chr4: 17367637-17368136 Medicago truncatula
Medtr4g049420 0.5kb downstream 0.5kb downstream 1669 true chr4: 17368137-17369805 Medicago truncatula
Medtr4g049420 0.5kb downstream 0.5kb downstream 500 false chr4: 17369306-17369805 Medicago truncatula
Medtr4g049420 1.0kb upstream 1.0kb upstream 2169 true chr4: 17367137-17369305 Medicago truncatula
Medtr4g049420 1.0kb upstream 1.0kb upstream 1000 false chr4: 17367137-17368136 Medicago truncatula
Medtr4g049420 1.0kb downstream 1.0kb downstream 2169 true chr4: 17368137-17370305 Medicago truncatula
Medtr4g049420 1.0kb downstream 1.0kb downstream 1000 false chr4: 17369306-17370305 Medicago truncatula
Medtr4g049420 2.0kb upstream 2.0kb upstream 3169 true chr4: 17366137-17369305 Medicago truncatula
Medtr4g049420 2.0kb upstream 2.0kb upstream 2000 false chr4: 17366137-17368136 Medicago truncatula
Medtr4g049420 2.0kb downstream 2.0kb downstream 3169 true chr4: 17368137-17371305 Medicago truncatula
Medtr4g049420 2.0kb downstream 2.0kb downstream 2000 false chr4: 17369306-17371305 Medicago truncatula
Medtr4g049420 5.0kb upstream 5.0kb upstream 6169 true chr4: 17363137-17369305 Medicago truncatula
Medtr4g049420 5.0kb upstream 5.0kb upstream 5000 false chr4: 17363137-17368136 Medicago truncatula
Medtr4g049420 5.0kb downstream 5.0kb downstream 6169 true chr4: 17368137-17374305 Medicago truncatula
Medtr4g049420 5.0kb downstream 5.0kb downstream 5000 false chr4: 17369306-17374305 Medicago truncatula
Medtr4g049420 10.0kb upstream 10.0kb upstream 11169 true chr4: 17358137-17369305 Medicago truncatula
Medtr4g049420 10.0kb upstream 10.0kb upstream 10000 false chr4: 17358137-17368136 Medicago truncatula
Medtr4g049420 10.0kb downstream 10.0kb downstream 11169 true chr4: 17368137-17379305 Medicago truncatula
Medtr4g049420 10.0kb downstream 10.0kb downstream 10000 false chr4: 17369306-17379305 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121781717 5273 Angiosperm View MSA
122314199 5265 Fabidae View MSA
124071812 5270 Rosid View MSA
123750415 5271 Pentapetalae View MSA
122773644 5272 Eudicot View MSA
121053284 5274 Embryophyte View MSA
123093310 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.387       Low
cufflinks 24.307     High  
cufflinks 42.607     High High
cufflinks 0.219       Low
cufflinks 28.724     High High
cufflinks 1.13        
cufflinks 1.698        
cufflinks 23.021     High  
cufflinks 0.49        

0 Strain