Gene : Medtr4g048220 M. truncatula Mt4.0v1
Defline:  (1 of 11) PTHR10953 - UBIQUITIN-ACTIVATING ENZYME E1 Description:  NEDD8-activating enzyme E1 regulatory subunit-like protein
Genomic Order:  2002 Name:  ? Medtr4g048220
Secondary Identifier:  ? PAC:31111956
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g048220 0.5kb upstream 0.5kb upstream 8746 true chr4: 17062032-17070777 Medicago truncatula
Medtr4g048220 0.5kb upstream 0.5kb upstream 500 false chr4: 17062032-17062531 Medicago truncatula
Medtr4g048220 0.5kb downstream 0.5kb downstream 8746 true chr4: 17062532-17071277 Medicago truncatula
Medtr4g048220 0.5kb downstream 0.5kb downstream 500 false chr4: 17070778-17071277 Medicago truncatula
Medtr4g048220 1.0kb upstream 1.0kb upstream 9246 true chr4: 17061532-17070777 Medicago truncatula
Medtr4g048220 1.0kb upstream 1.0kb upstream 1000 false chr4: 17061532-17062531 Medicago truncatula
Medtr4g048220 1.0kb downstream 1.0kb downstream 9246 true chr4: 17062532-17071777 Medicago truncatula
Medtr4g048220 1.0kb downstream 1.0kb downstream 1000 false chr4: 17070778-17071777 Medicago truncatula
Medtr4g048220 2.0kb upstream 2.0kb upstream 10246 true chr4: 17060532-17070777 Medicago truncatula
Medtr4g048220 2.0kb upstream 2.0kb upstream 2000 false chr4: 17060532-17062531 Medicago truncatula
Medtr4g048220 2.0kb downstream 2.0kb downstream 10246 true chr4: 17062532-17072777 Medicago truncatula
Medtr4g048220 2.0kb downstream 2.0kb downstream 2000 false chr4: 17070778-17072777 Medicago truncatula
Medtr4g048220 5.0kb upstream 5.0kb upstream 13246 true chr4: 17057532-17070777 Medicago truncatula
Medtr4g048220 5.0kb upstream 5.0kb upstream 5000 false chr4: 17057532-17062531 Medicago truncatula
Medtr4g048220 5.0kb downstream 5.0kb downstream 13246 true chr4: 17062532-17075777 Medicago truncatula
Medtr4g048220 5.0kb downstream 5.0kb downstream 5000 false chr4: 17070778-17075777 Medicago truncatula
Medtr4g048220 10.0kb upstream 10.0kb upstream 18246 true chr4: 17052532-17070777 Medicago truncatula
Medtr4g048220 10.0kb upstream 10.0kb upstream 10000 false chr4: 17052532-17062531 Medicago truncatula
Medtr4g048220 10.0kb downstream 10.0kb downstream 18246 true chr4: 17062532-17080777 Medicago truncatula
Medtr4g048220 10.0kb downstream 10.0kb downstream 10000 false chr4: 17070778-17080777 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041299 5273 Angiosperm View MSA
122302070 5265 Fabidae View MSA
124063581 5270 Rosid View MSA
123740431 5271 Pentapetalae View MSA
122791282 5272 Eudicot View MSA
121347842 5274 Embryophyte View MSA
123426326 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.573       High
cufflinks 0.626        
cufflinks 0.94        
cufflinks 0.246       Low
cufflinks 1.149        
cufflinks 0.238       Low
cufflinks 0.665        
cufflinks 0.717        
cufflinks 0.721        

0 Strain