Gene : Medtr4g051410 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR11760:SF19 - 30S RIBOSOMAL PROTEIN S3, CHLOROPLASTIC Description:  30S ribosomal protein S3
Genomic Order:  2158 Name:  ? Medtr4g051410
Secondary Identifier:  ? PAC:31113982
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g051410 0.5kb upstream 0.5kb upstream 1819 true chr4: 18344208-18346026 Medicago truncatula
Medtr4g051410 0.5kb upstream 0.5kb upstream 500 false chr4: 18345527-18346026 Medicago truncatula
Medtr4g051410 0.5kb downstream 0.5kb downstream 1819 true chr4: 18343708-18345526 Medicago truncatula
Medtr4g051410 0.5kb downstream 0.5kb downstream 500 false chr4: 18343708-18344207 Medicago truncatula
Medtr4g051410 1.0kb upstream 1.0kb upstream 2319 true chr4: 18344208-18346526 Medicago truncatula
Medtr4g051410 1.0kb upstream 1.0kb upstream 1000 false chr4: 18345527-18346526 Medicago truncatula
Medtr4g051410 1.0kb downstream 1.0kb downstream 2319 true chr4: 18343208-18345526 Medicago truncatula
Medtr4g051410 1.0kb downstream 1.0kb downstream 1000 false chr4: 18343208-18344207 Medicago truncatula
Medtr4g051410 2.0kb upstream 2.0kb upstream 3319 true chr4: 18344208-18347526 Medicago truncatula
Medtr4g051410 2.0kb upstream 2.0kb upstream 2000 false chr4: 18345527-18347526 Medicago truncatula
Medtr4g051410 2.0kb downstream 2.0kb downstream 3319 true chr4: 18342208-18345526 Medicago truncatula
Medtr4g051410 2.0kb downstream 2.0kb downstream 2000 false chr4: 18342208-18344207 Medicago truncatula
Medtr4g051410 5.0kb upstream 5.0kb upstream 6319 true chr4: 18344208-18350526 Medicago truncatula
Medtr4g051410 5.0kb upstream 5.0kb upstream 5000 false chr4: 18345527-18350526 Medicago truncatula
Medtr4g051410 5.0kb downstream 5.0kb downstream 6319 true chr4: 18339208-18345526 Medicago truncatula
Medtr4g051410 5.0kb downstream 5.0kb downstream 5000 false chr4: 18339208-18344207 Medicago truncatula
Medtr4g051410 10.0kb upstream 10.0kb upstream 11319 true chr4: 18344208-18355526 Medicago truncatula
Medtr4g051410 10.0kb upstream 10.0kb upstream 10000 false chr4: 18345527-18355526 Medicago truncatula
Medtr4g051410 10.0kb downstream 10.0kb downstream 11319 true chr4: 18334208-18345526 Medicago truncatula
Medtr4g051410 10.0kb downstream 10.0kb downstream 10000 false chr4: 18334208-18344207 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122262858 5265 Fabidae Singleton cluster - no MSA
124050236 5270 Rosid View MSA
123751101 5271 Pentapetalae View MSA
122796266 5272 Eudicot View MSA
122045419 5273 Angiosperm View MSA
121351411 5274 Embryophyte View MSA
123382156 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.964        
cufflinks 7.717        
cufflinks 9.427       High
cufflinks 0.534       Low
cufflinks 4.945        
cufflinks 4.38        
cufflinks 1.389        
cufflinks 8.853       High
cufflinks 0.607       Low

0 Strain