Gene : Medtr4g051220 M. truncatula Mt4.0v1
Defline:  (1 of 7) KOG3301 - Ribosomal protein S4 Description:  30S ribosomal protein S4
Genomic Order:  2129 Name:  ? Medtr4g051220
Secondary Identifier:  ? PAC:31113463
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g051220 0.5kb upstream 0.5kb upstream 1106 true chr4: 18181044-18182149 Medicago truncatula
Medtr4g051220 0.5kb upstream 0.5kb upstream 500 false chr4: 18181650-18182149 Medicago truncatula
Medtr4g051220 0.5kb downstream 0.5kb downstream 1106 true chr4: 18180544-18181649 Medicago truncatula
Medtr4g051220 0.5kb downstream 0.5kb downstream 500 false chr4: 18180544-18181043 Medicago truncatula
Medtr4g051220 1.0kb upstream 1.0kb upstream 1606 true chr4: 18181044-18182649 Medicago truncatula
Medtr4g051220 1.0kb upstream 1.0kb upstream 1000 false chr4: 18181650-18182649 Medicago truncatula
Medtr4g051220 1.0kb downstream 1.0kb downstream 1606 true chr4: 18180044-18181649 Medicago truncatula
Medtr4g051220 1.0kb downstream 1.0kb downstream 1000 false chr4: 18180044-18181043 Medicago truncatula
Medtr4g051220 2.0kb upstream 2.0kb upstream 2606 true chr4: 18181044-18183649 Medicago truncatula
Medtr4g051220 2.0kb upstream 2.0kb upstream 2000 false chr4: 18181650-18183649 Medicago truncatula
Medtr4g051220 2.0kb downstream 2.0kb downstream 2606 true chr4: 18179044-18181649 Medicago truncatula
Medtr4g051220 2.0kb downstream 2.0kb downstream 2000 false chr4: 18179044-18181043 Medicago truncatula
Medtr4g051220 5.0kb upstream 5.0kb upstream 5606 true chr4: 18181044-18186649 Medicago truncatula
Medtr4g051220 5.0kb upstream 5.0kb upstream 5000 false chr4: 18181650-18186649 Medicago truncatula
Medtr4g051220 5.0kb downstream 5.0kb downstream 5606 true chr4: 18176044-18181649 Medicago truncatula
Medtr4g051220 5.0kb downstream 5.0kb downstream 5000 false chr4: 18176044-18181043 Medicago truncatula
Medtr4g051220 10.0kb upstream 10.0kb upstream 10606 true chr4: 18181044-18191649 Medicago truncatula
Medtr4g051220 10.0kb upstream 10.0kb upstream 10000 false chr4: 18181650-18191649 Medicago truncatula
Medtr4g051220 10.0kb downstream 10.0kb downstream 10606 true chr4: 18171044-18181649 Medicago truncatula
Medtr4g051220 10.0kb downstream 10.0kb downstream 10000 false chr4: 18171044-18181043 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028910 5273 Angiosperm View MSA
122297871 5265 Fabidae View MSA
124073492 5270 Rosid View MSA
123750002 5271 Pentapetalae View MSA
122790562 5272 Eudicot View MSA
121298338 5274 Embryophyte View MSA
123336315 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.237        
cufflinks 0.977        
cufflinks 1.341        
cufflinks 0.077       Low
cufflinks 1.178        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.571        
cufflinks 1.619       High
cufflinks 0.11       Low

0 Strain