Gene : Medtr4g053270 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10766:SF60 - SYNTAXIN OF PLANT 111 Description:  endomembrane protein 70 family protein
Genomic Order:  2283 Name:  ? Medtr4g053270
Secondary Identifier:  ? PAC:31111907
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g053270 0.5kb upstream 0.5kb upstream 5989 true chr4: 19258028-19264016 Medicago truncatula
Medtr4g053270 0.5kb upstream 0.5kb upstream 500 false chr4: 19263517-19264016 Medicago truncatula
Medtr4g053270 0.5kb downstream 0.5kb downstream 5989 true chr4: 19257528-19263516 Medicago truncatula
Medtr4g053270 0.5kb downstream 0.5kb downstream 500 false chr4: 19257528-19258027 Medicago truncatula
Medtr4g053270 1.0kb upstream 1.0kb upstream 6489 true chr4: 19258028-19264516 Medicago truncatula
Medtr4g053270 1.0kb upstream 1.0kb upstream 1000 false chr4: 19263517-19264516 Medicago truncatula
Medtr4g053270 1.0kb downstream 1.0kb downstream 6489 true chr4: 19257028-19263516 Medicago truncatula
Medtr4g053270 1.0kb downstream 1.0kb downstream 1000 false chr4: 19257028-19258027 Medicago truncatula
Medtr4g053270 2.0kb upstream 2.0kb upstream 7489 true chr4: 19258028-19265516 Medicago truncatula
Medtr4g053270 2.0kb upstream 2.0kb upstream 2000 false chr4: 19263517-19265516 Medicago truncatula
Medtr4g053270 2.0kb downstream 2.0kb downstream 7489 true chr4: 19256028-19263516 Medicago truncatula
Medtr4g053270 2.0kb downstream 2.0kb downstream 2000 false chr4: 19256028-19258027 Medicago truncatula
Medtr4g053270 5.0kb upstream 5.0kb upstream 10489 true chr4: 19258028-19268516 Medicago truncatula
Medtr4g053270 5.0kb upstream 5.0kb upstream 5000 false chr4: 19263517-19268516 Medicago truncatula
Medtr4g053270 5.0kb downstream 5.0kb downstream 10489 true chr4: 19253028-19263516 Medicago truncatula
Medtr4g053270 5.0kb downstream 5.0kb downstream 5000 false chr4: 19253028-19258027 Medicago truncatula
Medtr4g053270 10.0kb upstream 10.0kb upstream 15489 true chr4: 19258028-19273516 Medicago truncatula
Medtr4g053270 10.0kb upstream 10.0kb upstream 10000 false chr4: 19263517-19273516 Medicago truncatula
Medtr4g053270 10.0kb downstream 10.0kb downstream 15489 true chr4: 19248028-19263516 Medicago truncatula
Medtr4g053270 10.0kb downstream 10.0kb downstream 10000 false chr4: 19248028-19258027 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792052 5273 Angiosperm View MSA
122302492 5265 Fabidae View MSA
124067275 5270 Rosid View MSA
123741376 5271 Pentapetalae View MSA
122796121 5272 Eudicot View MSA
121063308 5274 Embryophyte View MSA
123103068 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.77        
cufflinks 2.022        
cufflinks 2.614       High
cufflinks 1.181       Low
cufflinks 2.724       High
cufflinks 1.322       Low
cufflinks 2.33        
cufflinks 1.898        
cufflinks 2.001        

0 Strain