Gene : Medtr4g052950 M. truncatula Mt4.0v1
Defline:  (1 of 22) PTHR11064 - CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED Description:  class 2 transcription repressor NC2, beta subunit
Genomic Order:  2273 Name:  ? Medtr4g052950
Secondary Identifier:  ? PAC:31108226
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g052950 0.5kb upstream 0.5kb upstream 2698 true chr4: 19212553-19215250 Medicago truncatula
Medtr4g052950 0.5kb upstream 0.5kb upstream 500 false chr4: 19214751-19215250 Medicago truncatula
Medtr4g052950 0.5kb downstream 0.5kb downstream 2698 true chr4: 19212053-19214750 Medicago truncatula
Medtr4g052950 0.5kb downstream 0.5kb downstream 500 false chr4: 19212053-19212552 Medicago truncatula
Medtr4g052950 1.0kb upstream 1.0kb upstream 3198 true chr4: 19212553-19215750 Medicago truncatula
Medtr4g052950 1.0kb upstream 1.0kb upstream 1000 false chr4: 19214751-19215750 Medicago truncatula
Medtr4g052950 1.0kb downstream 1.0kb downstream 3198 true chr4: 19211553-19214750 Medicago truncatula
Medtr4g052950 1.0kb downstream 1.0kb downstream 1000 false chr4: 19211553-19212552 Medicago truncatula
Medtr4g052950 2.0kb upstream 2.0kb upstream 4198 true chr4: 19212553-19216750 Medicago truncatula
Medtr4g052950 2.0kb upstream 2.0kb upstream 2000 false chr4: 19214751-19216750 Medicago truncatula
Medtr4g052950 2.0kb downstream 2.0kb downstream 4198 true chr4: 19210553-19214750 Medicago truncatula
Medtr4g052950 2.0kb downstream 2.0kb downstream 2000 false chr4: 19210553-19212552 Medicago truncatula
Medtr4g052950 5.0kb upstream 5.0kb upstream 7198 true chr4: 19212553-19219750 Medicago truncatula
Medtr4g052950 5.0kb upstream 5.0kb upstream 5000 false chr4: 19214751-19219750 Medicago truncatula
Medtr4g052950 5.0kb downstream 5.0kb downstream 7198 true chr4: 19207553-19214750 Medicago truncatula
Medtr4g052950 5.0kb downstream 5.0kb downstream 5000 false chr4: 19207553-19212552 Medicago truncatula
Medtr4g052950 10.0kb upstream 10.0kb upstream 12198 true chr4: 19212553-19224750 Medicago truncatula
Medtr4g052950 10.0kb upstream 10.0kb upstream 10000 false chr4: 19214751-19224750 Medicago truncatula
Medtr4g052950 10.0kb downstream 10.0kb downstream 12198 true chr4: 19202553-19214750 Medicago truncatula
Medtr4g052950 10.0kb downstream 10.0kb downstream 10000 false chr4: 19202553-19212552 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299729 5265 Fabidae View MSA
124065449 5270 Rosid View MSA
123742361 5271 Pentapetalae View MSA
122794947 5272 Eudicot View MSA
122048157 5273 Angiosperm View MSA
123429094 5275 Viridiplantae View MSA
121348277 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.998       Low
cufflinks 2.46        
cufflinks 2.39        
cufflinks 1.545        
cufflinks 2.491        
cufflinks 1.029       Low
cufflinks 1.579        
cufflinks 2.429        
cufflinks 1.709        

0 Strain