Gene : Medtr4g053380 M. truncatula Mt4.0v1
Defline:  (1 of 14) PTHR32077:SF7 - FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 11 Description:  fasciclin-like arabinogalactan protein
Genomic Order:  2306 Name:  ? Medtr4g053380
Secondary Identifier:  ? PAC:31113952
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g053380 0.5kb upstream 0.5kb upstream 1830 true chr4: 19402236-19404065 Medicago truncatula
Medtr4g053380 0.5kb upstream 0.5kb upstream 500 false chr4: 19402236-19402735 Medicago truncatula
Medtr4g053380 0.5kb downstream 0.5kb downstream 1830 true chr4: 19402736-19404565 Medicago truncatula
Medtr4g053380 0.5kb downstream 0.5kb downstream 500 false chr4: 19404066-19404565 Medicago truncatula
Medtr4g053380 1.0kb upstream 1.0kb upstream 2330 true chr4: 19401736-19404065 Medicago truncatula
Medtr4g053380 1.0kb upstream 1.0kb upstream 1000 false chr4: 19401736-19402735 Medicago truncatula
Medtr4g053380 1.0kb downstream 1.0kb downstream 2330 true chr4: 19402736-19405065 Medicago truncatula
Medtr4g053380 1.0kb downstream 1.0kb downstream 1000 false chr4: 19404066-19405065 Medicago truncatula
Medtr4g053380 2.0kb upstream 2.0kb upstream 3330 true chr4: 19400736-19404065 Medicago truncatula
Medtr4g053380 2.0kb upstream 2.0kb upstream 2000 false chr4: 19400736-19402735 Medicago truncatula
Medtr4g053380 2.0kb downstream 2.0kb downstream 3330 true chr4: 19402736-19406065 Medicago truncatula
Medtr4g053380 2.0kb downstream 2.0kb downstream 2000 false chr4: 19404066-19406065 Medicago truncatula
Medtr4g053380 5.0kb upstream 5.0kb upstream 6330 true chr4: 19397736-19404065 Medicago truncatula
Medtr4g053380 5.0kb upstream 5.0kb upstream 5000 false chr4: 19397736-19402735 Medicago truncatula
Medtr4g053380 5.0kb downstream 5.0kb downstream 6330 true chr4: 19402736-19409065 Medicago truncatula
Medtr4g053380 5.0kb downstream 5.0kb downstream 5000 false chr4: 19404066-19409065 Medicago truncatula
Medtr4g053380 10.0kb upstream 10.0kb upstream 11330 true chr4: 19392736-19404065 Medicago truncatula
Medtr4g053380 10.0kb upstream 10.0kb upstream 10000 false chr4: 19392736-19402735 Medicago truncatula
Medtr4g053380 10.0kb downstream 10.0kb downstream 11330 true chr4: 19402736-19414065 Medicago truncatula
Medtr4g053380 10.0kb downstream 10.0kb downstream 10000 false chr4: 19404066-19414065 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122031651 5273 Angiosperm View MSA
122297659 5265 Fabidae View MSA
124075064 5270 Rosid View MSA
123628735 5271 Pentapetalae View MSA
122662989 5272 Eudicot View MSA
121300660 5274 Embryophyte View MSA
123338397 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.836        
cufflinks 0.443       Low
cufflinks 23.553     High High
cufflinks 6.245        
cufflinks 0.984        
cufflinks 5.524        
cufflinks 1.889        
cufflinks 18.629     High High

0 Strain