Gene : Medtr4g055230 M. truncatula Mt4.0v1
Defline:  (1 of 17) PF05910 - Plant protein of unknown function (DUF868) (DUF868) Description:  DUF868 family protein
Genomic Order:  2380 Name:  ? Medtr4g055230
Secondary Identifier:  ? PAC:31112648
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g055230 0.5kb upstream 0.5kb upstream 2348 true chr4: 20084538-20086885 Medicago truncatula
Medtr4g055230 0.5kb upstream 0.5kb upstream 500 false chr4: 20086386-20086885 Medicago truncatula
Medtr4g055230 0.5kb downstream 0.5kb downstream 2348 true chr4: 20084038-20086385 Medicago truncatula
Medtr4g055230 0.5kb downstream 0.5kb downstream 500 false chr4: 20084038-20084537 Medicago truncatula
Medtr4g055230 1.0kb upstream 1.0kb upstream 2848 true chr4: 20084538-20087385 Medicago truncatula
Medtr4g055230 1.0kb upstream 1.0kb upstream 1000 false chr4: 20086386-20087385 Medicago truncatula
Medtr4g055230 1.0kb downstream 1.0kb downstream 2848 true chr4: 20083538-20086385 Medicago truncatula
Medtr4g055230 1.0kb downstream 1.0kb downstream 1000 false chr4: 20083538-20084537 Medicago truncatula
Medtr4g055230 2.0kb upstream 2.0kb upstream 3848 true chr4: 20084538-20088385 Medicago truncatula
Medtr4g055230 2.0kb upstream 2.0kb upstream 2000 false chr4: 20086386-20088385 Medicago truncatula
Medtr4g055230 2.0kb downstream 2.0kb downstream 3848 true chr4: 20082538-20086385 Medicago truncatula
Medtr4g055230 2.0kb downstream 2.0kb downstream 2000 false chr4: 20082538-20084537 Medicago truncatula
Medtr4g055230 5.0kb upstream 5.0kb upstream 6848 true chr4: 20084538-20091385 Medicago truncatula
Medtr4g055230 5.0kb upstream 5.0kb upstream 5000 false chr4: 20086386-20091385 Medicago truncatula
Medtr4g055230 5.0kb downstream 5.0kb downstream 6848 true chr4: 20079538-20086385 Medicago truncatula
Medtr4g055230 5.0kb downstream 5.0kb downstream 5000 false chr4: 20079538-20084537 Medicago truncatula
Medtr4g055230 10.0kb upstream 10.0kb upstream 11848 true chr4: 20084538-20096385 Medicago truncatula
Medtr4g055230 10.0kb upstream 10.0kb upstream 10000 false chr4: 20086386-20096385 Medicago truncatula
Medtr4g055230 10.0kb downstream 10.0kb downstream 11848 true chr4: 20074538-20086385 Medicago truncatula
Medtr4g055230 10.0kb downstream 10.0kb downstream 10000 false chr4: 20074538-20084537 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310869 5265 Fabidae View MSA
124061671 5270 Rosid View MSA
123746033 5271 Pentapetalae View MSA
122790628 5272 Eudicot View MSA
122050647 5273 Angiosperm View MSA
121312046 5274 Embryophyte View MSA
123349257 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.722       Low
cufflinks 3.696        
cufflinks 4.146        
cufflinks 2.768       Low
cufflinks 4.427        
cufflinks 11.405     High High
cufflinks 9.202       High
cufflinks 3.958        
cufflinks 4.079        

0 Strain