Gene : Medtr4g056430 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR22891:SF40 - PROTEIN ARGONAUTE 5 Description:  eukaryotic translation initiation factor 2c
Genomic Order:  2443 Name:  ? Medtr4g056430
Secondary Identifier:  ? PAC:31110661
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g056430 0.5kb upstream 0.5kb upstream 6704 true chr4: 20661179-20667882 Medicago truncatula
Medtr4g056430 0.5kb upstream 0.5kb upstream 500 false chr4: 20667383-20667882 Medicago truncatula
Medtr4g056430 0.5kb downstream 0.5kb downstream 6704 true chr4: 20660679-20667382 Medicago truncatula
Medtr4g056430 0.5kb downstream 0.5kb downstream 500 false chr4: 20660679-20661178 Medicago truncatula
Medtr4g056430 1.0kb upstream 1.0kb upstream 7204 true chr4: 20661179-20668382 Medicago truncatula
Medtr4g056430 1.0kb upstream 1.0kb upstream 1000 false chr4: 20667383-20668382 Medicago truncatula
Medtr4g056430 1.0kb downstream 1.0kb downstream 7204 true chr4: 20660179-20667382 Medicago truncatula
Medtr4g056430 1.0kb downstream 1.0kb downstream 1000 false chr4: 20660179-20661178 Medicago truncatula
Medtr4g056430 2.0kb upstream 2.0kb upstream 8204 true chr4: 20661179-20669382 Medicago truncatula
Medtr4g056430 2.0kb upstream 2.0kb upstream 2000 false chr4: 20667383-20669382 Medicago truncatula
Medtr4g056430 2.0kb downstream 2.0kb downstream 8204 true chr4: 20659179-20667382 Medicago truncatula
Medtr4g056430 2.0kb downstream 2.0kb downstream 2000 false chr4: 20659179-20661178 Medicago truncatula
Medtr4g056430 5.0kb upstream 5.0kb upstream 11204 true chr4: 20661179-20672382 Medicago truncatula
Medtr4g056430 5.0kb upstream 5.0kb upstream 5000 false chr4: 20667383-20672382 Medicago truncatula
Medtr4g056430 5.0kb downstream 5.0kb downstream 11204 true chr4: 20656179-20667382 Medicago truncatula
Medtr4g056430 5.0kb downstream 5.0kb downstream 5000 false chr4: 20656179-20661178 Medicago truncatula
Medtr4g056430 10.0kb upstream 10.0kb upstream 16204 true chr4: 20661179-20677382 Medicago truncatula
Medtr4g056430 10.0kb upstream 10.0kb upstream 10000 false chr4: 20667383-20677382 Medicago truncatula
Medtr4g056430 10.0kb downstream 10.0kb downstream 16204 true chr4: 20651179-20667382 Medicago truncatula
Medtr4g056430 10.0kb downstream 10.0kb downstream 10000 false chr4: 20651179-20661178 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029598 5273 Angiosperm View MSA
122304908 5265 Fabidae View MSA
124068081 5270 Rosid View MSA
123740580 5271 Pentapetalae View MSA
122786970 5272 Eudicot View MSA
121350103 5274 Embryophyte View MSA
123428465 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.372       High
cufflinks 2.811        
cufflinks 0.808        
cufflinks 1.298        
cufflinks 0.862        
cufflinks 1.314        
cufflinks 5.61        
cufflinks 0.888        
cufflinks 16.624     High High

0 Strain