Gene : Medtr4g057330 M. truncatula Mt4.0v1
Defline:  (1 of 6) PF06136 - Domain of unknown function (DUF966) (DUF966) Description:  auxin-regulated protein
Genomic Order:  2483 Name:  ? Medtr4g057330
Secondary Identifier:  ? PAC:31109723
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g057330 0.5kb upstream 0.5kb upstream 3317 true chr4: 20980996-20984312 Medicago truncatula
Medtr4g057330 0.5kb upstream 0.5kb upstream 500 false chr4: 20983813-20984312 Medicago truncatula
Medtr4g057330 0.5kb downstream 0.5kb downstream 3317 true chr4: 20980496-20983812 Medicago truncatula
Medtr4g057330 0.5kb downstream 0.5kb downstream 500 false chr4: 20980496-20980995 Medicago truncatula
Medtr4g057330 1.0kb upstream 1.0kb upstream 3817 true chr4: 20980996-20984812 Medicago truncatula
Medtr4g057330 1.0kb upstream 1.0kb upstream 1000 false chr4: 20983813-20984812 Medicago truncatula
Medtr4g057330 1.0kb downstream 1.0kb downstream 3817 true chr4: 20979996-20983812 Medicago truncatula
Medtr4g057330 1.0kb downstream 1.0kb downstream 1000 false chr4: 20979996-20980995 Medicago truncatula
Medtr4g057330 2.0kb upstream 2.0kb upstream 4817 true chr4: 20980996-20985812 Medicago truncatula
Medtr4g057330 2.0kb upstream 2.0kb upstream 2000 false chr4: 20983813-20985812 Medicago truncatula
Medtr4g057330 2.0kb downstream 2.0kb downstream 4817 true chr4: 20978996-20983812 Medicago truncatula
Medtr4g057330 2.0kb downstream 2.0kb downstream 2000 false chr4: 20978996-20980995 Medicago truncatula
Medtr4g057330 5.0kb upstream 5.0kb upstream 7817 true chr4: 20980996-20988812 Medicago truncatula
Medtr4g057330 5.0kb upstream 5.0kb upstream 5000 false chr4: 20983813-20988812 Medicago truncatula
Medtr4g057330 5.0kb downstream 5.0kb downstream 7817 true chr4: 20975996-20983812 Medicago truncatula
Medtr4g057330 5.0kb downstream 5.0kb downstream 5000 false chr4: 20975996-20980995 Medicago truncatula
Medtr4g057330 10.0kb upstream 10.0kb upstream 12817 true chr4: 20980996-20993812 Medicago truncatula
Medtr4g057330 10.0kb upstream 10.0kb upstream 10000 false chr4: 20983813-20993812 Medicago truncatula
Medtr4g057330 10.0kb downstream 10.0kb downstream 12817 true chr4: 20970996-20983812 Medicago truncatula
Medtr4g057330 10.0kb downstream 10.0kb downstream 10000 false chr4: 20970996-20980995 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304109 5265 Fabidae View MSA
124064121 5270 Rosid View MSA
123739995 5271 Pentapetalae View MSA
122790698 5272 Eudicot View MSA
122050993 5273 Angiosperm View MSA
121349769 5274 Embryophyte View MSA
123381438 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.083        
cufflinks 0.581       High
cufflinks 0.368        
cufflinks 0.067     Low Low
cufflinks 0.618       High
cufflinks 0.065     Low Low
cufflinks 0.108        
cufflinks 0.415        
cufflinks 0.162        

0 Strain