Gene : Medtr4g025830 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR31374:SF56 - AUXIN-REGULATED PROTEIN-RELATED Description:  SAUR-like auxin-responsive family protein
Genomic Order:  1149 Name:  ? Medtr4g025830
Secondary Identifier:  ? PAC:31113052
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g025830 0.5kb upstream 0.5kb upstream 1839 true chr4: 8825096-8826934 Medicago truncatula
Medtr4g025830 0.5kb upstream 0.5kb upstream 500 false chr4: 8826435-8826934 Medicago truncatula
Medtr4g025830 0.5kb downstream 0.5kb downstream 1839 true chr4: 8824596-8826434 Medicago truncatula
Medtr4g025830 0.5kb downstream 0.5kb downstream 500 false chr4: 8824596-8825095 Medicago truncatula
Medtr4g025830 1.0kb upstream 1.0kb upstream 2339 true chr4: 8825096-8827434 Medicago truncatula
Medtr4g025830 1.0kb upstream 1.0kb upstream 1000 false chr4: 8826435-8827434 Medicago truncatula
Medtr4g025830 1.0kb downstream 1.0kb downstream 2339 true chr4: 8824096-8826434 Medicago truncatula
Medtr4g025830 1.0kb downstream 1.0kb downstream 1000 false chr4: 8824096-8825095 Medicago truncatula
Medtr4g025830 2.0kb upstream 2.0kb upstream 3339 true chr4: 8825096-8828434 Medicago truncatula
Medtr4g025830 2.0kb upstream 2.0kb upstream 2000 false chr4: 8826435-8828434 Medicago truncatula
Medtr4g025830 2.0kb downstream 2.0kb downstream 3339 true chr4: 8823096-8826434 Medicago truncatula
Medtr4g025830 2.0kb downstream 2.0kb downstream 2000 false chr4: 8823096-8825095 Medicago truncatula
Medtr4g025830 5.0kb upstream 5.0kb upstream 6339 true chr4: 8825096-8831434 Medicago truncatula
Medtr4g025830 5.0kb upstream 5.0kb upstream 5000 false chr4: 8826435-8831434 Medicago truncatula
Medtr4g025830 5.0kb downstream 5.0kb downstream 6339 true chr4: 8820096-8826434 Medicago truncatula
Medtr4g025830 5.0kb downstream 5.0kb downstream 5000 false chr4: 8820096-8825095 Medicago truncatula
Medtr4g025830 10.0kb upstream 10.0kb upstream 11339 true chr4: 8825096-8836434 Medicago truncatula
Medtr4g025830 10.0kb upstream 10.0kb upstream 10000 false chr4: 8826435-8836434 Medicago truncatula
Medtr4g025830 10.0kb downstream 10.0kb downstream 11339 true chr4: 8815096-8826434 Medicago truncatula
Medtr4g025830 10.0kb downstream 10.0kb downstream 10000 false chr4: 8815096-8825095 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301915 5265 Fabidae View MSA
124066518 5270 Rosid View MSA
123741344 5271 Pentapetalae View MSA
122791593 5272 Eudicot View MSA
122049926 5273 Angiosperm View MSA
121311651 5274 Embryophyte View MSA
123348921 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.039     High  
cufflinks 12.728     High Low
cufflinks 19.559     High  
cufflinks 95.465     High High
cufflinks 11.86     High Low
cufflinks 51.957     High  
cufflinks 82.388     High High
cufflinks 17.082     High  
cufflinks 80.198     High High

0 Strain