Gene : Medtr4g025730 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR31707:SF11 - PECTINESTERASE/PECTINESTERASE INHIBITOR 17-RELATED Description:  pectinesterase/pectinesterase inhibitor
Genomic Order:  1146 Name:  ? Medtr4g025730
Secondary Identifier:  ? PAC:31106373
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-1081 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g025730 0.5kb upstream 0.5kb upstream 4416 true chr4: 8763570-8767985 Medicago truncatula
Medtr4g025730 0.5kb upstream 0.5kb upstream 500 false chr4: 8763570-8764069 Medicago truncatula
Medtr4g025730 0.5kb downstream 0.5kb downstream 4416 true chr4: 8764070-8768485 Medicago truncatula
Medtr4g025730 0.5kb downstream 0.5kb downstream 500 false chr4: 8767986-8768485 Medicago truncatula
Medtr4g025730 1.0kb upstream 1.0kb upstream 4916 true chr4: 8763070-8767985 Medicago truncatula
Medtr4g025730 1.0kb upstream 1.0kb upstream 1000 false chr4: 8763070-8764069 Medicago truncatula
Medtr4g025730 1.0kb downstream 1.0kb downstream 4916 true chr4: 8764070-8768985 Medicago truncatula
Medtr4g025730 1.0kb downstream 1.0kb downstream 1000 false chr4: 8767986-8768985 Medicago truncatula
Medtr4g025730 2.0kb upstream 2.0kb upstream 5916 true chr4: 8762070-8767985 Medicago truncatula
Medtr4g025730 2.0kb upstream 2.0kb upstream 2000 false chr4: 8762070-8764069 Medicago truncatula
Medtr4g025730 2.0kb downstream 2.0kb downstream 5916 true chr4: 8764070-8769985 Medicago truncatula
Medtr4g025730 2.0kb downstream 2.0kb downstream 2000 false chr4: 8767986-8769985 Medicago truncatula
Medtr4g025730 5.0kb upstream 5.0kb upstream 8916 true chr4: 8759070-8767985 Medicago truncatula
Medtr4g025730 5.0kb upstream 5.0kb upstream 5000 false chr4: 8759070-8764069 Medicago truncatula
Medtr4g025730 5.0kb downstream 5.0kb downstream 8916 true chr4: 8764070-8772985 Medicago truncatula
Medtr4g025730 5.0kb downstream 5.0kb downstream 5000 false chr4: 8767986-8772985 Medicago truncatula
Medtr4g025730 10.0kb upstream 10.0kb upstream 13916 true chr4: 8754070-8767985 Medicago truncatula
Medtr4g025730 10.0kb upstream 10.0kb upstream 10000 false chr4: 8754070-8764069 Medicago truncatula
Medtr4g025730 10.0kb downstream 10.0kb downstream 13916 true chr4: 8764070-8777985 Medicago truncatula
Medtr4g025730 10.0kb downstream 10.0kb downstream 10000 false chr4: 8767986-8777985 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310355 5265 Fabidae View MSA
124070854 5270 Rosid View MSA
123751128 5271 Pentapetalae View MSA
122793966 5272 Eudicot View MSA
122051530 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 45.238     High  
cufflinks 6.406       Low
cufflinks 12.992     High  
cufflinks 171.721     High  
cufflinks 4.184       Low
cufflinks 226.269     High  
cufflinks 373.446     High High
cufflinks 10.068     High  
cufflinks 209.036     High  

0 Strain