Gene : Medtr4g035880 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR31080:SF19 - PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN Description:  plant invertase/pectin methylesterase inhibitor
Genomic Order:  1611 Name:  ? Medtr4g035880
Secondary Identifier:  ? PAC:31111372
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-1081 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g035880 0.5kb upstream 0.5kb upstream 1488 true chr4: 12695738-12697225 Medicago truncatula
Medtr4g035880 0.5kb upstream 0.5kb upstream 500 false chr4: 12696726-12697225 Medicago truncatula
Medtr4g035880 0.5kb downstream 0.5kb downstream 1488 true chr4: 12695238-12696725 Medicago truncatula
Medtr4g035880 0.5kb downstream 0.5kb downstream 500 false chr4: 12695238-12695737 Medicago truncatula
Medtr4g035880 1.0kb upstream 1.0kb upstream 1988 true chr4: 12695738-12697725 Medicago truncatula
Medtr4g035880 1.0kb upstream 1.0kb upstream 1000 false chr4: 12696726-12697725 Medicago truncatula
Medtr4g035880 1.0kb downstream 1.0kb downstream 1988 true chr4: 12694738-12696725 Medicago truncatula
Medtr4g035880 1.0kb downstream 1.0kb downstream 1000 false chr4: 12694738-12695737 Medicago truncatula
Medtr4g035880 2.0kb upstream 2.0kb upstream 2988 true chr4: 12695738-12698725 Medicago truncatula
Medtr4g035880 2.0kb upstream 2.0kb upstream 2000 false chr4: 12696726-12698725 Medicago truncatula
Medtr4g035880 2.0kb downstream 2.0kb downstream 2988 true chr4: 12693738-12696725 Medicago truncatula
Medtr4g035880 2.0kb downstream 2.0kb downstream 2000 false chr4: 12693738-12695737 Medicago truncatula
Medtr4g035880 5.0kb upstream 5.0kb upstream 5988 true chr4: 12695738-12701725 Medicago truncatula
Medtr4g035880 5.0kb upstream 5.0kb upstream 5000 false chr4: 12696726-12701725 Medicago truncatula
Medtr4g035880 5.0kb downstream 5.0kb downstream 5988 true chr4: 12690738-12696725 Medicago truncatula
Medtr4g035880 5.0kb downstream 5.0kb downstream 5000 false chr4: 12690738-12695737 Medicago truncatula
Medtr4g035880 10.0kb upstream 10.0kb upstream 10988 true chr4: 12695738-12706725 Medicago truncatula
Medtr4g035880 10.0kb upstream 10.0kb upstream 10000 false chr4: 12696726-12706725 Medicago truncatula
Medtr4g035880 10.0kb downstream 10.0kb downstream 10988 true chr4: 12685738-12696725 Medicago truncatula
Medtr4g035880 10.0kb downstream 10.0kb downstream 10000 false chr4: 12685738-12695737 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306375 5265 Fabidae View MSA
124061401 5270 Rosid View MSA
123751304 5271 Pentapetalae View MSA
122797599 5272 Eudicot View MSA
122046899 5273 Angiosperm View MSA
121310670 5274 Embryophyte View MSA
123348096 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.161       Low
cufflinks 380.77     High  
cufflinks 340.617     High  
cufflinks 24.796     High  
cufflinks 450.35     High  
cufflinks 11.196     High  
cufflinks 9.46        
cufflinks 365.403     High  
cufflinks 3.982        

0 Strain