Gene : Medtr4g037515 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11082:SF29 - TRNA-DIHYDROURIDINE SYNTHASE Description:  tRNA-dihydrouridine synthase
Genomic Order:  1728 Name:  ? Medtr4g037515
Secondary Identifier:  ? PAC:31113323
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g037515 0.5kb upstream 0.5kb upstream 6621 true chr4: 13802133-13808753 Medicago truncatula
Medtr4g037515 0.5kb upstream 0.5kb upstream 500 false chr4: 13808254-13808753 Medicago truncatula
Medtr4g037515 0.5kb downstream 0.5kb downstream 6621 true chr4: 13801633-13808253 Medicago truncatula
Medtr4g037515 0.5kb downstream 0.5kb downstream 500 false chr4: 13801633-13802132 Medicago truncatula
Medtr4g037515 1.0kb upstream 1.0kb upstream 7121 true chr4: 13802133-13809253 Medicago truncatula
Medtr4g037515 1.0kb upstream 1.0kb upstream 1000 false chr4: 13808254-13809253 Medicago truncatula
Medtr4g037515 1.0kb downstream 1.0kb downstream 7121 true chr4: 13801133-13808253 Medicago truncatula
Medtr4g037515 1.0kb downstream 1.0kb downstream 1000 false chr4: 13801133-13802132 Medicago truncatula
Medtr4g037515 2.0kb upstream 2.0kb upstream 8121 true chr4: 13802133-13810253 Medicago truncatula
Medtr4g037515 2.0kb upstream 2.0kb upstream 2000 false chr4: 13808254-13810253 Medicago truncatula
Medtr4g037515 2.0kb downstream 2.0kb downstream 8121 true chr4: 13800133-13808253 Medicago truncatula
Medtr4g037515 2.0kb downstream 2.0kb downstream 2000 false chr4: 13800133-13802132 Medicago truncatula
Medtr4g037515 5.0kb upstream 5.0kb upstream 11121 true chr4: 13802133-13813253 Medicago truncatula
Medtr4g037515 5.0kb upstream 5.0kb upstream 5000 false chr4: 13808254-13813253 Medicago truncatula
Medtr4g037515 5.0kb downstream 5.0kb downstream 11121 true chr4: 13797133-13808253 Medicago truncatula
Medtr4g037515 5.0kb downstream 5.0kb downstream 5000 false chr4: 13797133-13802132 Medicago truncatula
Medtr4g037515 10.0kb upstream 10.0kb upstream 16121 true chr4: 13802133-13818253 Medicago truncatula
Medtr4g037515 10.0kb upstream 10.0kb upstream 10000 false chr4: 13808254-13818253 Medicago truncatula
Medtr4g037515 10.0kb downstream 10.0kb downstream 16121 true chr4: 13792133-13808253 Medicago truncatula
Medtr4g037515 10.0kb downstream 10.0kb downstream 10000 false chr4: 13792133-13802132 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313193 5265 Fabidae View MSA
124063739 5270 Rosid View MSA
123742826 5271 Pentapetalae View MSA
122786306 5272 Eudicot View MSA
122042083 5273 Angiosperm View MSA
121347615 5274 Embryophyte View MSA
123428841 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.804        
cufflinks 3.41       High
cufflinks 2.709        
cufflinks 0.379       Low
cufflinks 4.428       High
cufflinks 0.244       Low
cufflinks 0.922        
cufflinks 2.636        
cufflinks 0.489        

0 Strain