Gene : Medtr4g037470 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR13832:SF193 - PROTEIN PHOSPHATASE 2C 1-RELATED Description:  catalytic/protein phosphatase type 2C
Genomic Order:  1825 Name:  ? Medtr4g037470
Secondary Identifier:  ? PAC:31115252
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g037470 0.5kb upstream 0.5kb upstream 5655 true chr4: 14958114-14963768 Medicago truncatula
Medtr4g037470 0.5kb upstream 0.5kb upstream 500 false chr4: 14958114-14958613 Medicago truncatula
Medtr4g037470 0.5kb downstream 0.5kb downstream 5655 true chr4: 14958614-14964268 Medicago truncatula
Medtr4g037470 0.5kb downstream 0.5kb downstream 500 false chr4: 14963769-14964268 Medicago truncatula
Medtr4g037470 1.0kb upstream 1.0kb upstream 6155 true chr4: 14957614-14963768 Medicago truncatula
Medtr4g037470 1.0kb upstream 1.0kb upstream 1000 false chr4: 14957614-14958613 Medicago truncatula
Medtr4g037470 1.0kb downstream 1.0kb downstream 6155 true chr4: 14958614-14964768 Medicago truncatula
Medtr4g037470 1.0kb downstream 1.0kb downstream 1000 false chr4: 14963769-14964768 Medicago truncatula
Medtr4g037470 2.0kb upstream 2.0kb upstream 7155 true chr4: 14956614-14963768 Medicago truncatula
Medtr4g037470 2.0kb upstream 2.0kb upstream 2000 false chr4: 14956614-14958613 Medicago truncatula
Medtr4g037470 2.0kb downstream 2.0kb downstream 7155 true chr4: 14958614-14965768 Medicago truncatula
Medtr4g037470 2.0kb downstream 2.0kb downstream 2000 false chr4: 14963769-14965768 Medicago truncatula
Medtr4g037470 5.0kb upstream 5.0kb upstream 10155 true chr4: 14953614-14963768 Medicago truncatula
Medtr4g037470 5.0kb upstream 5.0kb upstream 5000 false chr4: 14953614-14958613 Medicago truncatula
Medtr4g037470 5.0kb downstream 5.0kb downstream 10155 true chr4: 14958614-14968768 Medicago truncatula
Medtr4g037470 5.0kb downstream 5.0kb downstream 5000 false chr4: 14963769-14968768 Medicago truncatula
Medtr4g037470 10.0kb upstream 10.0kb upstream 15155 true chr4: 14948614-14963768 Medicago truncatula
Medtr4g037470 10.0kb upstream 10.0kb upstream 10000 false chr4: 14948614-14958613 Medicago truncatula
Medtr4g037470 10.0kb downstream 10.0kb downstream 15155 true chr4: 14958614-14973768 Medicago truncatula
Medtr4g037470 10.0kb downstream 10.0kb downstream 10000 false chr4: 14963769-14973768 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027541 5273 Angiosperm View MSA
122299575 5265 Fabidae View MSA
124064580 5270 Rosid View MSA
123739469 5271 Pentapetalae View MSA
122786449 5272 Eudicot View MSA
121350683 5274 Embryophyte View MSA
123426661 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.897        
cufflinks 1.299        
cufflinks 1.616        
cufflinks 1.063        
cufflinks 1.601        
cufflinks 0.528       Low
cufflinks 2.449       High
cufflinks 1.18        
cufflinks 2.519       High

0 Strain