Gene : Medtr4g045853 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR31062:SF11 - XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 9 Description:  xyloglucan endotransglucosylase/hydrolase family protein
Genomic Order:  1890 Name:  ? Medtr4g045853
Secondary Identifier:  ? PAC:31112933
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g045853 0.5kb upstream 0.5kb upstream 4474 true chr4: 15792852-15797325 Medicago truncatula
Medtr4g045853 0.5kb upstream 0.5kb upstream 500 false chr4: 15792852-15793351 Medicago truncatula
Medtr4g045853 0.5kb downstream 0.5kb downstream 4474 true chr4: 15793352-15797825 Medicago truncatula
Medtr4g045853 0.5kb downstream 0.5kb downstream 500 false chr4: 15797326-15797825 Medicago truncatula
Medtr4g045853 1.0kb upstream 1.0kb upstream 4974 true chr4: 15792352-15797325 Medicago truncatula
Medtr4g045853 1.0kb upstream 1.0kb upstream 1000 false chr4: 15792352-15793351 Medicago truncatula
Medtr4g045853 1.0kb downstream 1.0kb downstream 4974 true chr4: 15793352-15798325 Medicago truncatula
Medtr4g045853 1.0kb downstream 1.0kb downstream 1000 false chr4: 15797326-15798325 Medicago truncatula
Medtr4g045853 2.0kb upstream 2.0kb upstream 5974 true chr4: 15791352-15797325 Medicago truncatula
Medtr4g045853 2.0kb upstream 2.0kb upstream 2000 false chr4: 15791352-15793351 Medicago truncatula
Medtr4g045853 2.0kb downstream 2.0kb downstream 5974 true chr4: 15793352-15799325 Medicago truncatula
Medtr4g045853 2.0kb downstream 2.0kb downstream 2000 false chr4: 15797326-15799325 Medicago truncatula
Medtr4g045853 5.0kb upstream 5.0kb upstream 8974 true chr4: 15788352-15797325 Medicago truncatula
Medtr4g045853 5.0kb upstream 5.0kb upstream 5000 false chr4: 15788352-15793351 Medicago truncatula
Medtr4g045853 5.0kb downstream 5.0kb downstream 8974 true chr4: 15793352-15802325 Medicago truncatula
Medtr4g045853 5.0kb downstream 5.0kb downstream 5000 false chr4: 15797326-15802325 Medicago truncatula
Medtr4g045853 10.0kb upstream 10.0kb upstream 13974 true chr4: 15783352-15797325 Medicago truncatula
Medtr4g045853 10.0kb upstream 10.0kb upstream 10000 false chr4: 15783352-15793351 Medicago truncatula
Medtr4g045853 10.0kb downstream 10.0kb downstream 13974 true chr4: 15793352-15807325 Medicago truncatula
Medtr4g045853 10.0kb downstream 10.0kb downstream 10000 false chr4: 15797326-15807325 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311223 5265 Fabidae View MSA
124074045 5270 Rosid View MSA
123744569 5271 Pentapetalae View MSA
122789262 5272 Eudicot View MSA
122045078 5273 Angiosperm View MSA
121350333 5274 Embryophyte View MSA
123381682 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.955       High
cufflinks 2.907        
cufflinks 0.467       Low
cufflinks 0.524        
cufflinks 0.925        
cufflinks 0.649        
cufflinks 2.363        
cufflinks 0.795        
cufflinks 6.928       High

0 Strain