Gene : Medtr4g094212 M. truncatula Mt4.0v1
Defline:  (1 of 6) PF06454 - Protein of unknown function (DUF1084) (DUF1084) Description:  tobamovirus multiplication-like protein
Genomic Order:  4753 Name:  ? Medtr4g094212
Secondary Identifier:  ? PAC:31114790
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g094212 0.5kb upstream 0.5kb upstream 3913 true chr4: 37445639-37449551 Medicago truncatula
Medtr4g094212 0.5kb upstream 0.5kb upstream 500 false chr4: 37445639-37446138 Medicago truncatula
Medtr4g094212 0.5kb downstream 0.5kb downstream 3913 true chr4: 37446139-37450051 Medicago truncatula
Medtr4g094212 0.5kb downstream 0.5kb downstream 500 false chr4: 37449552-37450051 Medicago truncatula
Medtr4g094212 1.0kb upstream 1.0kb upstream 4413 true chr4: 37445139-37449551 Medicago truncatula
Medtr4g094212 1.0kb upstream 1.0kb upstream 1000 false chr4: 37445139-37446138 Medicago truncatula
Medtr4g094212 1.0kb downstream 1.0kb downstream 4413 true chr4: 37446139-37450551 Medicago truncatula
Medtr4g094212 1.0kb downstream 1.0kb downstream 1000 false chr4: 37449552-37450551 Medicago truncatula
Medtr4g094212 2.0kb upstream 2.0kb upstream 5413 true chr4: 37444139-37449551 Medicago truncatula
Medtr4g094212 2.0kb upstream 2.0kb upstream 2000 false chr4: 37444139-37446138 Medicago truncatula
Medtr4g094212 2.0kb downstream 2.0kb downstream 5413 true chr4: 37446139-37451551 Medicago truncatula
Medtr4g094212 2.0kb downstream 2.0kb downstream 2000 false chr4: 37449552-37451551 Medicago truncatula
Medtr4g094212 5.0kb upstream 5.0kb upstream 8413 true chr4: 37441139-37449551 Medicago truncatula
Medtr4g094212 5.0kb upstream 5.0kb upstream 5000 false chr4: 37441139-37446138 Medicago truncatula
Medtr4g094212 5.0kb downstream 5.0kb downstream 8413 true chr4: 37446139-37454551 Medicago truncatula
Medtr4g094212 5.0kb downstream 5.0kb downstream 5000 false chr4: 37449552-37454551 Medicago truncatula
Medtr4g094212 10.0kb upstream 10.0kb upstream 13413 true chr4: 37436139-37449551 Medicago truncatula
Medtr4g094212 10.0kb upstream 10.0kb upstream 10000 false chr4: 37436139-37446138 Medicago truncatula
Medtr4g094212 10.0kb downstream 10.0kb downstream 13413 true chr4: 37446139-37459551 Medicago truncatula
Medtr4g094212 10.0kb downstream 10.0kb downstream 10000 false chr4: 37449552-37459551 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301286 5265 Fabidae View MSA
124070535 5270 Rosid View MSA
123753465 5271 Pentapetalae View MSA
122796045 5272 Eudicot View MSA
122049721 5273 Angiosperm View MSA
121345693 5274 Embryophyte View MSA
123426001 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.013     Low  
cufflinks 0.003     Low  
cufflinks 0.028     Low  
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.084        
cufflinks 0.001     Low Low
cufflinks 0.227       High

0 Strain