Gene : Medtr4g094210 M. truncatula Mt4.0v1
Defline:  (1 of 10) KOG1546 - Metacaspase involved in regulation of apoptosis Description:  ICE-like protease (caspase) p20 domain protein
Genomic Order:  4748 Name:  ? Medtr4g094210
Secondary Identifier:  ? PAC:31111599
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g094210 0.5kb upstream 0.5kb upstream 2682 true chr4: 37405282-37407963 Medicago truncatula
Medtr4g094210 0.5kb upstream 0.5kb upstream 500 false chr4: 37405282-37405781 Medicago truncatula
Medtr4g094210 0.5kb downstream 0.5kb downstream 2682 true chr4: 37405782-37408463 Medicago truncatula
Medtr4g094210 0.5kb downstream 0.5kb downstream 500 false chr4: 37407964-37408463 Medicago truncatula
Medtr4g094210 1.0kb upstream 1.0kb upstream 3182 true chr4: 37404782-37407963 Medicago truncatula
Medtr4g094210 1.0kb upstream 1.0kb upstream 1000 false chr4: 37404782-37405781 Medicago truncatula
Medtr4g094210 1.0kb downstream 1.0kb downstream 3182 true chr4: 37405782-37408963 Medicago truncatula
Medtr4g094210 1.0kb downstream 1.0kb downstream 1000 false chr4: 37407964-37408963 Medicago truncatula
Medtr4g094210 2.0kb upstream 2.0kb upstream 4182 true chr4: 37403782-37407963 Medicago truncatula
Medtr4g094210 2.0kb upstream 2.0kb upstream 2000 false chr4: 37403782-37405781 Medicago truncatula
Medtr4g094210 2.0kb downstream 2.0kb downstream 4182 true chr4: 37405782-37409963 Medicago truncatula
Medtr4g094210 2.0kb downstream 2.0kb downstream 2000 false chr4: 37407964-37409963 Medicago truncatula
Medtr4g094210 5.0kb upstream 5.0kb upstream 7182 true chr4: 37400782-37407963 Medicago truncatula
Medtr4g094210 5.0kb upstream 5.0kb upstream 5000 false chr4: 37400782-37405781 Medicago truncatula
Medtr4g094210 5.0kb downstream 5.0kb downstream 7182 true chr4: 37405782-37412963 Medicago truncatula
Medtr4g094210 5.0kb downstream 5.0kb downstream 5000 false chr4: 37407964-37412963 Medicago truncatula
Medtr4g094210 10.0kb upstream 10.0kb upstream 12182 true chr4: 37395782-37407963 Medicago truncatula
Medtr4g094210 10.0kb upstream 10.0kb upstream 10000 false chr4: 37395782-37405781 Medicago truncatula
Medtr4g094210 10.0kb downstream 10.0kb downstream 12182 true chr4: 37405782-37417963 Medicago truncatula
Medtr4g094210 10.0kb downstream 10.0kb downstream 10000 false chr4: 37407964-37417963 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027947 5273 Angiosperm View MSA
122311960 5265 Fabidae View MSA
124070963 5270 Rosid View MSA
123753362 5271 Pentapetalae View MSA
122775074 5272 Eudicot View MSA
123428899 5275 Viridiplantae View MSA
121350269 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.032     Low  
cufflinks 0.014     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.071       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low Low
cufflinks 0.017     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain