Gene : Medtr4g094232 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR24093:SF124 - COPPER-TRANSPORTING ATPASE PAA1, CHLOROPLASTIC Description:  copper-transporting ATPase PAA1, putative
Genomic Order:  4758 Name:  ? Medtr4g094232
Secondary Identifier:  ? PAC:31112553
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g094232 0.5kb upstream 0.5kb upstream 17138 true chr4: 37480703-37497840 Medicago truncatula
Medtr4g094232 0.5kb upstream 0.5kb upstream 500 false chr4: 37480703-37481202 Medicago truncatula
Medtr4g094232 0.5kb downstream 0.5kb downstream 17138 true chr4: 37481203-37498340 Medicago truncatula
Medtr4g094232 0.5kb downstream 0.5kb downstream 500 false chr4: 37497841-37498340 Medicago truncatula
Medtr4g094232 1.0kb upstream 1.0kb upstream 17638 true chr4: 37480203-37497840 Medicago truncatula
Medtr4g094232 1.0kb upstream 1.0kb upstream 1000 false chr4: 37480203-37481202 Medicago truncatula
Medtr4g094232 1.0kb downstream 1.0kb downstream 17638 true chr4: 37481203-37498840 Medicago truncatula
Medtr4g094232 1.0kb downstream 1.0kb downstream 1000 false chr4: 37497841-37498840 Medicago truncatula
Medtr4g094232 2.0kb upstream 2.0kb upstream 18638 true chr4: 37479203-37497840 Medicago truncatula
Medtr4g094232 2.0kb upstream 2.0kb upstream 2000 false chr4: 37479203-37481202 Medicago truncatula
Medtr4g094232 2.0kb downstream 2.0kb downstream 18638 true chr4: 37481203-37499840 Medicago truncatula
Medtr4g094232 2.0kb downstream 2.0kb downstream 2000 false chr4: 37497841-37499840 Medicago truncatula
Medtr4g094232 5.0kb upstream 5.0kb upstream 21638 true chr4: 37476203-37497840 Medicago truncatula
Medtr4g094232 5.0kb upstream 5.0kb upstream 5000 false chr4: 37476203-37481202 Medicago truncatula
Medtr4g094232 5.0kb downstream 5.0kb downstream 21638 true chr4: 37481203-37502840 Medicago truncatula
Medtr4g094232 5.0kb downstream 5.0kb downstream 5000 false chr4: 37497841-37502840 Medicago truncatula
Medtr4g094232 10.0kb upstream 10.0kb upstream 26638 true chr4: 37471203-37497840 Medicago truncatula
Medtr4g094232 10.0kb upstream 10.0kb upstream 10000 false chr4: 37471203-37481202 Medicago truncatula
Medtr4g094232 10.0kb downstream 10.0kb downstream 26638 true chr4: 37481203-37507840 Medicago truncatula
Medtr4g094232 10.0kb downstream 10.0kb downstream 10000 false chr4: 37497841-37507840 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313280 5265 Fabidae View MSA
124074915 5270 Rosid View MSA
123753356 5271 Pentapetalae View MSA
122796910 5272 Eudicot View MSA
122047959 5273 Angiosperm View MSA
121350289 5274 Embryophyte View MSA
123427971 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.359        
cufflinks 2.563        
cufflinks 2.361        
cufflinks 0.153       Low
cufflinks 3.12       High
cufflinks 0.062     Low Low
cufflinks 0.375        
cufflinks 2.924       High
cufflinks 0.443        

0 Strain