Gene : Medtr4g093970 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR11945:SF179 - MADS-BOX PROTEIN SVP Description:  MADS-box transcription factor
Genomic Order:  4711 Name:  ? Medtr4g093970
Secondary Identifier:  ? PAC:31109139
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g093970 0.5kb upstream 0.5kb upstream 10526 true chr4: 37162662-37173187 Medicago truncatula
Medtr4g093970 0.5kb upstream 0.5kb upstream 500 false chr4: 37172688-37173187 Medicago truncatula
Medtr4g093970 0.5kb downstream 0.5kb downstream 10526 true chr4: 37162162-37172687 Medicago truncatula
Medtr4g093970 0.5kb downstream 0.5kb downstream 500 false chr4: 37162162-37162661 Medicago truncatula
Medtr4g093970 1.0kb upstream 1.0kb upstream 11026 true chr4: 37162662-37173687 Medicago truncatula
Medtr4g093970 1.0kb upstream 1.0kb upstream 1000 false chr4: 37172688-37173687 Medicago truncatula
Medtr4g093970 1.0kb downstream 1.0kb downstream 11026 true chr4: 37161662-37172687 Medicago truncatula
Medtr4g093970 1.0kb downstream 1.0kb downstream 1000 false chr4: 37161662-37162661 Medicago truncatula
Medtr4g093970 2.0kb upstream 2.0kb upstream 12026 true chr4: 37162662-37174687 Medicago truncatula
Medtr4g093970 2.0kb upstream 2.0kb upstream 2000 false chr4: 37172688-37174687 Medicago truncatula
Medtr4g093970 2.0kb downstream 2.0kb downstream 12026 true chr4: 37160662-37172687 Medicago truncatula
Medtr4g093970 2.0kb downstream 2.0kb downstream 2000 false chr4: 37160662-37162661 Medicago truncatula
Medtr4g093970 5.0kb upstream 5.0kb upstream 15026 true chr4: 37162662-37177687 Medicago truncatula
Medtr4g093970 5.0kb upstream 5.0kb upstream 5000 false chr4: 37172688-37177687 Medicago truncatula
Medtr4g093970 5.0kb downstream 5.0kb downstream 15026 true chr4: 37157662-37172687 Medicago truncatula
Medtr4g093970 5.0kb downstream 5.0kb downstream 5000 false chr4: 37157662-37162661 Medicago truncatula
Medtr4g093970 10.0kb upstream 10.0kb upstream 20026 true chr4: 37162662-37182687 Medicago truncatula
Medtr4g093970 10.0kb upstream 10.0kb upstream 10000 false chr4: 37172688-37182687 Medicago truncatula
Medtr4g093970 10.0kb downstream 10.0kb downstream 20026 true chr4: 37152662-37172687 Medicago truncatula
Medtr4g093970 10.0kb downstream 10.0kb downstream 10000 false chr4: 37152662-37162661 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296327 5265 Fabidae View MSA
124040371 5270 Rosid View MSA
123753664 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.501        
cufflinks 2.314       High
cufflinks 1.997        
cufflinks 0.328       Low
cufflinks 2.014        
cufflinks 0.871        
cufflinks 0.964        
cufflinks 2.02        
cufflinks 0.421       Low

0 Strain