Gene : Medtr4g094580 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10840 - PROGRAMMED CELL DEATH PROTEIN 5 Description:  double-stranded DNA-binding-like protein
Genomic Order:  4871 Name:  ? Medtr4g094580
Secondary Identifier:  ? PAC:31112664
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g094580 0.5kb upstream 0.5kb upstream 5620 true chr4: 38271388-38277007 Medicago truncatula
Medtr4g094580 0.5kb upstream 0.5kb upstream 500 false chr4: 38271388-38271887 Medicago truncatula
Medtr4g094580 0.5kb downstream 0.5kb downstream 5620 true chr4: 38271888-38277507 Medicago truncatula
Medtr4g094580 0.5kb downstream 0.5kb downstream 500 false chr4: 38277008-38277507 Medicago truncatula
Medtr4g094580 1.0kb upstream 1.0kb upstream 6120 true chr4: 38270888-38277007 Medicago truncatula
Medtr4g094580 1.0kb upstream 1.0kb upstream 1000 false chr4: 38270888-38271887 Medicago truncatula
Medtr4g094580 1.0kb downstream 1.0kb downstream 6120 true chr4: 38271888-38278007 Medicago truncatula
Medtr4g094580 1.0kb downstream 1.0kb downstream 1000 false chr4: 38277008-38278007 Medicago truncatula
Medtr4g094580 2.0kb upstream 2.0kb upstream 7120 true chr4: 38269888-38277007 Medicago truncatula
Medtr4g094580 2.0kb upstream 2.0kb upstream 2000 false chr4: 38269888-38271887 Medicago truncatula
Medtr4g094580 2.0kb downstream 2.0kb downstream 7120 true chr4: 38271888-38279007 Medicago truncatula
Medtr4g094580 2.0kb downstream 2.0kb downstream 2000 false chr4: 38277008-38279007 Medicago truncatula
Medtr4g094580 5.0kb upstream 5.0kb upstream 10120 true chr4: 38266888-38277007 Medicago truncatula
Medtr4g094580 5.0kb upstream 5.0kb upstream 5000 false chr4: 38266888-38271887 Medicago truncatula
Medtr4g094580 5.0kb downstream 5.0kb downstream 10120 true chr4: 38271888-38282007 Medicago truncatula
Medtr4g094580 5.0kb downstream 5.0kb downstream 5000 false chr4: 38277008-38282007 Medicago truncatula
Medtr4g094580 10.0kb upstream 10.0kb upstream 15120 true chr4: 38261888-38277007 Medicago truncatula
Medtr4g094580 10.0kb upstream 10.0kb upstream 10000 false chr4: 38261888-38271887 Medicago truncatula
Medtr4g094580 10.0kb downstream 10.0kb downstream 15120 true chr4: 38271888-38287007 Medicago truncatula
Medtr4g094580 10.0kb downstream 10.0kb downstream 10000 false chr4: 38277008-38287007 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300116 5265 Fabidae View MSA
124064859 5270 Rosid View MSA
123737967 5271 Pentapetalae View MSA
122786334 5272 Eudicot View MSA
122044055 5273 Angiosperm View MSA
121343869 5274 Embryophyte View MSA
123426803 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.522        
cufflinks 7.546        
cufflinks 7.574        
cufflinks 7.0        
cufflinks 7.519        
cufflinks 4.131       Low
cufflinks 7.879        
cufflinks 7.431        
cufflinks 9.534       High

0 Strain