Gene : Medtr4g094730 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR33734:SF5 - LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 Description:  LysM domain GPI-anchored protein
Genomic Order:  4941 Name:  ? Medtr4g094730
Secondary Identifier:  ? PAC:31113683
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g094730 0.5kb upstream 0.5kb upstream 3177 true chr4: 38855407-38858583 Medicago truncatula
Medtr4g094730 0.5kb upstream 0.5kb upstream 500 false chr4: 38855407-38855906 Medicago truncatula
Medtr4g094730 0.5kb downstream 0.5kb downstream 3177 true chr4: 38855907-38859083 Medicago truncatula
Medtr4g094730 0.5kb downstream 0.5kb downstream 500 false chr4: 38858584-38859083 Medicago truncatula
Medtr4g094730 1.0kb upstream 1.0kb upstream 3677 true chr4: 38854907-38858583 Medicago truncatula
Medtr4g094730 1.0kb upstream 1.0kb upstream 1000 false chr4: 38854907-38855906 Medicago truncatula
Medtr4g094730 1.0kb downstream 1.0kb downstream 3677 true chr4: 38855907-38859583 Medicago truncatula
Medtr4g094730 1.0kb downstream 1.0kb downstream 1000 false chr4: 38858584-38859583 Medicago truncatula
Medtr4g094730 2.0kb upstream 2.0kb upstream 4677 true chr4: 38853907-38858583 Medicago truncatula
Medtr4g094730 2.0kb upstream 2.0kb upstream 2000 false chr4: 38853907-38855906 Medicago truncatula
Medtr4g094730 2.0kb downstream 2.0kb downstream 4677 true chr4: 38855907-38860583 Medicago truncatula
Medtr4g094730 2.0kb downstream 2.0kb downstream 2000 false chr4: 38858584-38860583 Medicago truncatula
Medtr4g094730 5.0kb upstream 5.0kb upstream 7677 true chr4: 38850907-38858583 Medicago truncatula
Medtr4g094730 5.0kb upstream 5.0kb upstream 5000 false chr4: 38850907-38855906 Medicago truncatula
Medtr4g094730 5.0kb downstream 5.0kb downstream 7677 true chr4: 38855907-38863583 Medicago truncatula
Medtr4g094730 5.0kb downstream 5.0kb downstream 5000 false chr4: 38858584-38863583 Medicago truncatula
Medtr4g094730 10.0kb upstream 10.0kb upstream 12677 true chr4: 38845907-38858583 Medicago truncatula
Medtr4g094730 10.0kb upstream 10.0kb upstream 10000 false chr4: 38845907-38855906 Medicago truncatula
Medtr4g094730 10.0kb downstream 10.0kb downstream 12677 true chr4: 38855907-38868583 Medicago truncatula
Medtr4g094730 10.0kb downstream 10.0kb downstream 10000 false chr4: 38858584-38868583 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041196 5273 Angiosperm View MSA
122305015 5265 Fabidae View MSA
124066383 5270 Rosid View MSA
123740270 5271 Pentapetalae View MSA
122790310 5272 Eudicot View MSA
121350262 5274 Embryophyte View MSA
123381651 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.07       Low
cufflinks 40.552     High  
cufflinks 34.474     High  
cufflinks 26.377     High  
cufflinks 42.068     High  
cufflinks 16.508     High  
cufflinks 48.739     High  
cufflinks 33.409     High  
cufflinks 50.579     High  

0 Strain