Gene : Medtr4g094688 M. truncatula Mt4.0v1
Defline:  (1 of 1) PF01535//PF04782//PF13041 - PPR repeat (PPR) // Protein of unknown function (DUF632) (DUF632) // PPR repeat family (PPR_2) Description:  PPR containing plant protein
Genomic Order:  4929 Name:  ? Medtr4g094688
Secondary Identifier:  ? PAC:31109829
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g094688 0.5kb upstream 0.5kb upstream 5725 true chr4: 38725816-38731540 Medicago truncatula
Medtr4g094688 0.5kb upstream 0.5kb upstream 500 false chr4: 38731041-38731540 Medicago truncatula
Medtr4g094688 0.5kb downstream 0.5kb downstream 5725 true chr4: 38725316-38731040 Medicago truncatula
Medtr4g094688 0.5kb downstream 0.5kb downstream 500 false chr4: 38725316-38725815 Medicago truncatula
Medtr4g094688 1.0kb upstream 1.0kb upstream 6225 true chr4: 38725816-38732040 Medicago truncatula
Medtr4g094688 1.0kb upstream 1.0kb upstream 1000 false chr4: 38731041-38732040 Medicago truncatula
Medtr4g094688 1.0kb downstream 1.0kb downstream 6225 true chr4: 38724816-38731040 Medicago truncatula
Medtr4g094688 1.0kb downstream 1.0kb downstream 1000 false chr4: 38724816-38725815 Medicago truncatula
Medtr4g094688 2.0kb upstream 2.0kb upstream 7225 true chr4: 38725816-38733040 Medicago truncatula
Medtr4g094688 2.0kb upstream 2.0kb upstream 2000 false chr4: 38731041-38733040 Medicago truncatula
Medtr4g094688 2.0kb downstream 2.0kb downstream 7225 true chr4: 38723816-38731040 Medicago truncatula
Medtr4g094688 2.0kb downstream 2.0kb downstream 2000 false chr4: 38723816-38725815 Medicago truncatula
Medtr4g094688 5.0kb upstream 5.0kb upstream 10225 true chr4: 38725816-38736040 Medicago truncatula
Medtr4g094688 5.0kb upstream 5.0kb upstream 5000 false chr4: 38731041-38736040 Medicago truncatula
Medtr4g094688 5.0kb downstream 5.0kb downstream 10225 true chr4: 38720816-38731040 Medicago truncatula
Medtr4g094688 5.0kb downstream 5.0kb downstream 5000 false chr4: 38720816-38725815 Medicago truncatula
Medtr4g094688 10.0kb upstream 10.0kb upstream 15225 true chr4: 38725816-38741040 Medicago truncatula
Medtr4g094688 10.0kb upstream 10.0kb upstream 10000 false chr4: 38731041-38741040 Medicago truncatula
Medtr4g094688 10.0kb downstream 10.0kb downstream 15225 true chr4: 38715816-38731040 Medicago truncatula
Medtr4g094688 10.0kb downstream 10.0kb downstream 10000 false chr4: 38715816-38725815 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306369 5265 Fabidae View MSA
124062465 5270 Rosid View MSA
123739222 5271 Pentapetalae View MSA
122787096 5272 Eudicot View MSA
122044895 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121350963 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.798        
cufflinks 1.598        
cufflinks 2.061        
cufflinks 0.792        
cufflinks 2.018        
cufflinks 0.358       Low
cufflinks 1.427        
cufflinks 1.448        
cufflinks 1.46        

0 Strain