Gene : Medtr4g083390 M. truncatula Mt4.0v1
Defline:  (1 of 127) PF02362 - B3 DNA binding domain (B3) Description:  B3 DNA-binding domain protein
Genomic Order:  4081 Name:  ? Medtr4g083390
Secondary Identifier:  ? PAC:31106811
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g083390 0.5kb upstream 0.5kb upstream 3071 true chr4: 32456722-32459792 Medicago truncatula
Medtr4g083390 0.5kb upstream 0.5kb upstream 500 false chr4: 32459293-32459792 Medicago truncatula
Medtr4g083390 0.5kb downstream 0.5kb downstream 3071 true chr4: 32456222-32459292 Medicago truncatula
Medtr4g083390 0.5kb downstream 0.5kb downstream 500 false chr4: 32456222-32456721 Medicago truncatula
Medtr4g083390 1.0kb upstream 1.0kb upstream 3571 true chr4: 32456722-32460292 Medicago truncatula
Medtr4g083390 1.0kb upstream 1.0kb upstream 1000 false chr4: 32459293-32460292 Medicago truncatula
Medtr4g083390 1.0kb downstream 1.0kb downstream 3571 true chr4: 32455722-32459292 Medicago truncatula
Medtr4g083390 1.0kb downstream 1.0kb downstream 1000 false chr4: 32455722-32456721 Medicago truncatula
Medtr4g083390 2.0kb upstream 2.0kb upstream 4571 true chr4: 32456722-32461292 Medicago truncatula
Medtr4g083390 2.0kb upstream 2.0kb upstream 2000 false chr4: 32459293-32461292 Medicago truncatula
Medtr4g083390 2.0kb downstream 2.0kb downstream 4571 true chr4: 32454722-32459292 Medicago truncatula
Medtr4g083390 2.0kb downstream 2.0kb downstream 2000 false chr4: 32454722-32456721 Medicago truncatula
Medtr4g083390 5.0kb upstream 5.0kb upstream 7571 true chr4: 32456722-32464292 Medicago truncatula
Medtr4g083390 5.0kb upstream 5.0kb upstream 5000 false chr4: 32459293-32464292 Medicago truncatula
Medtr4g083390 5.0kb downstream 5.0kb downstream 7571 true chr4: 32451722-32459292 Medicago truncatula
Medtr4g083390 5.0kb downstream 5.0kb downstream 5000 false chr4: 32451722-32456721 Medicago truncatula
Medtr4g083390 10.0kb upstream 10.0kb upstream 12571 true chr4: 32456722-32469292 Medicago truncatula
Medtr4g083390 10.0kb upstream 10.0kb upstream 10000 false chr4: 32459293-32469292 Medicago truncatula
Medtr4g083390 10.0kb downstream 10.0kb downstream 12571 true chr4: 32446722-32459292 Medicago truncatula
Medtr4g083390 10.0kb downstream 10.0kb downstream 10000 false chr4: 32446722-32456721 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308155 5265 Fabidae View MSA
124070911 5270 Rosid View MSA
123753418 5271 Pentapetalae View MSA
122797829 5272 Eudicot View MSA
122050133 5273 Angiosperm View MSA
121350826 5274 Embryophyte View MSA
123427153 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.858        
cufflinks 0.366       Low
cufflinks 0.447        
cufflinks 1.085       High
cufflinks 0.397       Low
cufflinks 1.031       High
cufflinks 0.942        
cufflinks 0.391       Low
cufflinks 0.713        

0 Strain