Gene : Medtr4g083630 M. truncatula Mt4.0v1
Defline:  (1 of 210) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Description:  PPR containing plant-like protein
Genomic Order:  4091 Name:  ? Medtr4g083630
Secondary Identifier:  ? PAC:31114959
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g083630 0.5kb upstream 0.5kb upstream 3420 true chr4: 32533157-32536576 Medicago truncatula
Medtr4g083630 0.5kb upstream 0.5kb upstream 500 false chr4: 32536077-32536576 Medicago truncatula
Medtr4g083630 0.5kb downstream 0.5kb downstream 3420 true chr4: 32532657-32536076 Medicago truncatula
Medtr4g083630 0.5kb downstream 0.5kb downstream 500 false chr4: 32532657-32533156 Medicago truncatula
Medtr4g083630 1.0kb upstream 1.0kb upstream 3920 true chr4: 32533157-32537076 Medicago truncatula
Medtr4g083630 1.0kb upstream 1.0kb upstream 1000 false chr4: 32536077-32537076 Medicago truncatula
Medtr4g083630 1.0kb downstream 1.0kb downstream 3920 true chr4: 32532157-32536076 Medicago truncatula
Medtr4g083630 1.0kb downstream 1.0kb downstream 1000 false chr4: 32532157-32533156 Medicago truncatula
Medtr4g083630 2.0kb upstream 2.0kb upstream 4920 true chr4: 32533157-32538076 Medicago truncatula
Medtr4g083630 2.0kb upstream 2.0kb upstream 2000 false chr4: 32536077-32538076 Medicago truncatula
Medtr4g083630 2.0kb downstream 2.0kb downstream 4920 true chr4: 32531157-32536076 Medicago truncatula
Medtr4g083630 2.0kb downstream 2.0kb downstream 2000 false chr4: 32531157-32533156 Medicago truncatula
Medtr4g083630 5.0kb upstream 5.0kb upstream 7920 true chr4: 32533157-32541076 Medicago truncatula
Medtr4g083630 5.0kb upstream 5.0kb upstream 5000 false chr4: 32536077-32541076 Medicago truncatula
Medtr4g083630 5.0kb downstream 5.0kb downstream 7920 true chr4: 32528157-32536076 Medicago truncatula
Medtr4g083630 5.0kb downstream 5.0kb downstream 5000 false chr4: 32528157-32533156 Medicago truncatula
Medtr4g083630 10.0kb upstream 10.0kb upstream 12920 true chr4: 32533157-32546076 Medicago truncatula
Medtr4g083630 10.0kb upstream 10.0kb upstream 10000 false chr4: 32536077-32546076 Medicago truncatula
Medtr4g083630 10.0kb downstream 10.0kb downstream 12920 true chr4: 32523157-32536076 Medicago truncatula
Medtr4g083630 10.0kb downstream 10.0kb downstream 10000 false chr4: 32523157-32533156 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311034 5265 Fabidae View MSA
124065193 5270 Rosid View MSA
123739429 5271 Pentapetalae View MSA
122786943 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.127        
cufflinks 3.539        
cufflinks 4.947       High
cufflinks 0.13        
cufflinks 4.607       High
cufflinks 0.105     Low Low
cufflinks 0.18        
cufflinks 4.393       High
cufflinks 0.255        

0 Strain